Job Description P28629 Confidence 99.75% Date Wed Jan 25 15:20:47 GMT 2012 Rank 103 Aligned Residues 304 % Identity 14% Template d1v2da_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 1.90

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		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		R	T	S	L	G	S	L	L	D	H	T	G	A	F	G	E	S	E	K	Y	A	A	R	V	F	G	A	D	.	R	S	W	S	V	V	V	G	T	S	G	S	N	R	T	I	M	Q	A	C	M	T	D	N	D	V	V	V	V	D	R	N	C	H	K	S	I	E	Q	G	L	M	L	T	G	A	K	P	V	Y	M
Query Conservation																														.
Alig confidence															.															.
Template Conservation															.
Template Sequence		L	G	R	Q	D	Q	Y	A	P	P	A	G	L	.	P	A	L	R	E	A	L	A	E	E	F	A	V	E	P	E	S	V	V	V	T	S	G	A	T	E	A	L	Y	V	L	L	Q	S	L	V	G	P	G	D	E	V	V	V	L	E	P	F	F	D	V	Y	L	P	D	A	F	L	A	G	A	K	A	R	L	V
Template Known Secondary structure		T	T	T	S		S				T	T			.												T	S		G	G	G					S	S															T	T								S			T	T								T	T
Template Predicted Secondary structure															.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.					.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.
Query SS confidence																																																					.	.	.	.
Query Sequence		V	P	S	R	N	R	Y	G	I	I	G	P	I	Y	P	Q	E	M	Q	P	E	T	L	Q	K	K	I	S	E	S	P	L	T	K	D	K	A	G	Q	K	P	S	Y	C	V	V	T	N	C	T	Y	.	.	.	.	D	G	V	C	Y	N	A	K	E	A	Q	D	L	L	E	K	T	S	D	R	L	H	F	D	E
Query Conservation																																																					.	.	.	.
Alig confidence									.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template Conservation									.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	D	L	T	P	E	.	.	.	.	.	.	.	G	F	R	L	D	L	S	A	L	E	K	A	L	T	P	R	T	.	.	.	.	.	.	.	.	.	.	R	A	L	L	L	N	T	P	M	N	P	T	G	L	V	F	G	E	R	E	L	E	A	I	A	R	L	A	R	A	H	D	L	F	L	I	S	D	E
Template Known Secondary structure							T	T	.	.	.	.	.	.	.											T	T			T	T		.	.	.	.	.	.	.	.	.	.							S	S		T	T	T																			T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		130	.	.	.	.	.	.								.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.											.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	W	Y	G	Y	A	R	F	N	P	I	Y	A	D	H	Y	A	M	R	G	E	P	G	D	H	N	G	P	T	V	F	A	T	H	S	T	H	K	L	L	N	A	L	S	Q	A	S	Y	I	H	V	R	E	G	R	G	A	I	N	F	S	R	F	N	Q	A	Y	M	M	H	A	T	T	S	P	L	Y	A	I	C
Query Conservation
Alig confidence			.																						.	.	.	.	.	.	.																									.	.	.
Template Conservation			.																						.	.	.	.	.	.	.																									.	.	.
Template Sequence		V	.	Y	D	E	L	Y	Y	G	E	R	P	R	R	L	R	E	F	A	P	E	R	T	.	.	.	.	.	.	.	F	T	V	G	S	A	G	K	R	L	E	A	T	G	Y	R	V	G	W	I	V	G	P	K	.	.	.	E	F	M	P	R	L	A	G	M	R	Q	W	T	S	F	S	A	P	T	P	L	Q	A
Template Known Secondary structure		T	.	T	T	T		B	S	S	S										T	T	T		.	.	.	.	.	.	.										T	T		G	G	G									T	.	.	.	T	T												T	S	S
Template Predicted Secondary structure			.																						.	.	.	.	.	.	.																									.	.	.
Template SS confidence
		193		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.								.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.				.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		429	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	N	D	V	A	V	S	M	M	D	G	N	S	G	L	S	L	T	Q	E	V	I	D	E	A	V	D	F	R	Q	A	M	A	R	L	Y	K	E	F	T	A	D	G	S	W	F	F	K	P	W	N	K	E	V	V	T	D	P	Q	T	G	K	T	Y	D	F	A	D	A	P	T	K	L	L	T	T	V	Q	D
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	V	A	E	A	L	K	L	A	R	R	E	G	F	Y	E	A	L	R	E	G	Y	R	R	R	R	D	L	L	A	G	G	L	R	A	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure													T	T																							T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		509	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570									.	.	.	.	.	.	.	.	.	580
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.
Query Sequence		C	W	V	M	H	P	G	E	S	W	H	G	F	K	D	I	P	D	N	W	S	M	L	D	P	I	K	V	S	I	L	A	P	G	M	G	E	D	G	E	L	E	E	T	G	V	P	A	A	L	V	T	A	W	L	G	R	H	G	I	V	P	.	.	.	.	.	.	.	.	T	R	T	T	D	F	Q	I	M	F
Query Conservation																																																																.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.													.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.													.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	G	L	R	V	Y	V	P	E	G	T	Y	F	.	.	.	.	L	M	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	P	G	W	D	A	F	R	L	V	E	E	A	R	V	A	L	I	P	A	S	A	F	Y	L	E	D	P	P	K	D	L	F	R	F
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	T							S	B	S	S		.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T										T							G	G	G	G		S	S	S			T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.													.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
													298	.	300	.	.	.	.	.	.	.	.	.					310	.	.															.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		581	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	S	M	G	V	T	R	G	K	W	G	T	L	V	N	T	L	C	S	F
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	A	F	C	K	T	E	E	E	L	H	L	A	L	E	R	L	G	R	V
Template Known Secondary structure		.	.				S
Template Predicted Secondary structure		.	.
Template SS confidence
				349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions