Job Description P28629 Confidence 96.30% Date Wed Jan 25 15:20:47 GMT 2012 Rank 345 Aligned Residues 133 % Identity 12% Template d1qo0d_ SCOP info Flavodoxin-like CheY-like Positive regulator of the amidase operon AmiR Resolution 2.25

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	V	L	I	V	E	S	E	F	L	H	Q	D	T	W	V	G	N	A	V	E	R	L	A	D	A	L	S	Q	Q	N	V	T	V	I	K	S	T	S	F	D	D	G	F	A	I	L	S	S	N	E	A	I	D	C	L	M	F	S	Y	Q	M	E	H	P	D	E	H	Q	N	V	R	Q	L	I	G	K	L	H
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.																									.	.	.	.	.																		.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.																									.	.	.	.	.																		.	.	.	.
Template Sequence		L	Q	V	L	V	L	N	P	P	G	E	V	S	.	.	.	.	.	.	.	.	D	A	L	V	L	Q	L	I	R	I	G	C	S	V	R	Q	C	W	P	P	P	E	A	F	.	.	.	.	.	D	V	P	V	D	V	V	F	T	S	I	F	Q	N	R	H	H	.	.	.	.	D	E	I	A	A	L	L	A	A
Template Known Secondary structure								S		T	T				.	.	.	.	.	.	.	.											T								S			S	S		.	.	.	.	.	S	S			S								S	S	T			.	.	.	.
Template Predicted Secondary structure															.	.	.	.	.	.	.	.																									.	.	.	.	.																		.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.									.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.						50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.					.	.	.	70	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	Q	Q	N	V	P	V	F	L	L	G	D	R	E	K	A	L	A	A	M	D	R	D	L	L	E	L	V	D	E	F	A	W	I	L	E	D	T	A	D	F	I	A	G	R	A	V	A	A	M	T	R	Y	R	Q	Q	L	L	P	P	L	F	S	A	L	M	K	Y	S	D	I
Query Conservation
Alig confidence			.																.
Template Conservation			.																.
Template Sequence		G	.	T	P	R	T	T	L	V	A	L	V	E	Y	E	S	P	.	A	V	L	S	Q	I	I	E	L	E	C	H	G	V	I	T	Q	P	L	D	A	H	R	V	L	P	V	L	V	S	A	R	R	I	S	E	E	M	A	K	L	K	Q	K	T	E	Q	L	Q	D	R	I	A	G
Template Known Secondary structure		S	.		T	T											S		.										T		S					S	S			G	G	G
Template Predicted Secondary structure			.																.
Template SS confidence
		76		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions