Job Description P28629 Confidence 99.90% Date Wed Jan 25 15:20:47 GMT 2012 Rank 36 Aligned Residues 307 % Identity 19% Template d1m6sa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 1.80

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		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.				260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure																																																																.	.	.
Query SS confidence																																																																.	.	.
Query Sequence		G	S	L	L	D	H	T	G	A	F	G	E	S	E	K	Y	A	A	R	V	F	G	A	D	R	S	W	S	V	V	V	G	T	S	G	S	N	R	T	I	M	Q	A	C	M	T	D	N	D	V	V	V	V	D	R	N	C	H	K	S	I	E	.	.	.	Q	G	L	M	L	T	G	A	K	P	V	Y	M	V	P
Query Conservation																																																																.	.	.
Alig confidence																																		.																														.	.	.
Template Conservation																																		.
Template Sequence		D	D	V	Y	G	E	D	P	T	I	N	E	L	E	R	L	A	A	E	T	F	G	K	E	A	A	L	F	V	P	S	G	.	T	M	G	N	Q	V	S	I	M	A	H	T	Q	R	G	D	E	V	I	L	E	A	D	S	H	I	F	W	Y	E	V	G	A	M	A	V	L	S	G	V	M	P	H	P	V	P	G
Template Known Secondary structure			G	G	G	T																T	T		S						S			.														T	T							T	T						S	S	T	T						T
Template Predicted Secondary structure																																		.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.						.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.
Query Sequence		S	R	N	R	Y	G	I	I	G	P	I	Y	P	Q	E	M	Q	P	E	T	L	Q	K	K	I	S	E	S	P	L	T	K	D	K	A	G	Q	K	P	S	Y	C	V	V	T	N	C	T	Y	D	G	V	.	.	.	.	.	C	Y	N	A	K	E	A	Q	D	L	L	E	K	T	S	D	R	L	H	F	D	E	A
Query Conservation																																																						.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.																				.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Sequence		K	.	.	.	.	.	.	.	.	.	.	.	N	G	A	M	D	P	D	D	V	R	K	A	I	R	P	R	N	.	.	.	.	I	H	F	P	R	T	S	L	I	A	I	E	N	T	H	N	R	S	G	G	R	V	V	P	L	E	N	I	K	E	I	C	T	I	A	K	E	H	G	I	N	V	H	I	D	G	A
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	T	T											S			S		.	.	.	.	T	T	S										S	S	B	T	T	T	T	S	B																		T								T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template SS confidence
		106												.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.					.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	Y	G	Y	A	R	F	N	P	I	Y	A	D	H	Y	A	M	R	G	E	P	G	D	H	N	G	P	T	V	F	A	T	H	S	T	H	K	L	L	N	A	L	S	Q	A	S	Y	I	H	V	R	E	G	R	G	A	I	N	F	S	R	F	N	Q	A	Y	M	M	H	A	T	T	S	P	L	Y	A	I	C	A
Query Conservation
Alig confidence													.											.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Conservation													.											.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Sequence		R	I	F	N	A	S	I	A	S	G	V	.	P	V	K	E	Y	A	G	Y	A	D	.	.	.	.	.	.	.	S	V	M	F	C	L	S	G	L	C	A	P	V	G	S	V	V	V	G	D	R	.	.	.	.	.	.	D	F	I	E	R	A	R	K	A	R	K	M	L	G	G	G	M	R	Q	A	G	V	L	A
Template Known Secondary structure		T											.								T		S	.	.	.	.	.	.	.												S	S									.	.	.	.	.	.														T				S	S	T
Template Predicted Secondary structure													.											.	.	.	.	.	.	.																						.	.	.	.	.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.								.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.							.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	N	D	V	A	V	S	M	M	D	G	N	S	G	L	S	L	T	Q	E	V	I	D	E	A	V	D	F	R	Q	A	M	A	R	L	Y	K	E	F	T	A	D	G	S	W	F	F	K	P	W	N	K	E	V	V	T	D	P	Q	T	G	K	T	Y	D	F	A	D	A	P	T	K	L	L	T	T	V	Q	D	C
Query Conservation
Alig confidence		.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	A	A	G	I	I	A	L	T	K	M	V	D	R	L	K	E	D	H	E	N	A	R	F	L	A	L	K	L	K	E	I	G	Y	S	V	N	P	E	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.										S	S	T	T																			T		B			G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
						238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	V	M	H	P	G	E	S	W	H	G	F	K	D	I	P	D	N	W	S	M	L	D	P	I	K	V	S	I	L	A	P	G	M	G	E	D	G	E	L	E	E	T	G	V	P	A	A	L	V	T	A	W	L	G	R	H	G	I	V	P	T	R	T	T	D	F	Q	I	M	F	L	F	S	M	G	V	T	R	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	T	N	M	V	I	L	R	T	D	N	L	K	V	N	A	.	.	.	.	.	.	.	.	.	H	G	F	I	E	A	L	R	N	S	G	V	L	A	N	A	V	S	D	T	E	I	R	L	V	T	H	K	D	V	S	R	N
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S							T	T	S	S	S			.	.	.	.	.	.	.	.	.											T								T	T								T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Template SS confidence
																								278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.										.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	W	G	T	L	V	N	T	L	C	S	F	K	R	H	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	I	E	E	A	L	N	I	F	E	K	L	F	R	K	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions