Return to main results Retrieve Phyre Job Id

Job DescriptionP28629
Confidence99.79%DateWed Jan 25 15:20:47 GMT 2012
Rank87Aligned Residues321
% Identity11%Templated1bw0a_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases AAT-like
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   201........210.........220. ........230.........240.........250.........260.......
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Query Sequence  LDHTGAFGESEKYAARVFGAD. . . . . . . . . . . . . RSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGA
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Template Sequence  YFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGI
Template Known Secondary structure 


TT



STTTGGG

GGGS

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TTT
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   71........80.........90.........100.........110.........120.........130.........140.........150
 
   268.270.........280.........290.........300.........310.........320... ......330.........340...
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Query Sequence  KPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY. . . . DGVCYNAKEAQDLLEKTSDR
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Template Sequence  GMHFYNCRPENDWEA. . . . . . . . DLDEIRRLKDDKT. . . . . . . . . . KLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLP
Template Known Secondary structure  GGGTT........


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TTT




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   151........160..... ....170........ .180.........190.........200.........210..
 
   344.....350.........360.........370.........380.........390.........400.........410.........420...
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Query Sequence  LHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYMMHATTSP
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Template Sequence  LFSDEI. YAGMVFKGKDPNATFTSVADFETTVPRVILGGTANLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPC
Template Known Secondary structure 
T.TTT
B

SS
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   213..... .220.........230.........240.........250.........260.........270.........280.........290.
 
   424.....430.........440.........450.........460.........470.........480.........490.........500...
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Query Sequence  LYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLL
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Template Conservation                    .              
   
    
     
  
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Template Sequence  TVVQAALGEALLNTPQEH. LDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLMS. . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  SS
.TTSTT



BTT.......................
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   293......300.........310 .........320.........330.........340........
 
   504.....510.........520.........530.........540.........550.........560.........570 .........
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Query Sequence  TTVQDCWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVP. . . . TRTTDFQIM
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Template Conservation  ............................... 
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RIDLEKYRDIKTDVE. . . . . . . . FFEKLLEEENVQVLPGTIFHAPGFTR
Template Known Secondary structure  ...............................
GGGBSS

S........

GGGGT
TT
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   349350.........360... ......370.........380.........
 
   580.........590.........600.....
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Query Sequence  FLFSMGVTRGKWGTLVNTLCSFKRHY
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Template Sequence  LTT. . TRPVEVYREAVERIKAFCQRH
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   390.. .......400.........410...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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