Job Description P28629 Confidence 98.11% Date Wed Jan 25 15:20:47 GMT 2012 Rank 251 Aligned Residues 118 % Identity 19% Template c3r0jA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:possible two component system response transcriptional PDBTitle: structure of phop from mycobacterium tuberculosis Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	V	L	I	V	E	S	E	F	L	H	Q	D	T	W	V	G	N	A	V	E	R	L	A	D	A	L	S	Q	Q	N	V	T	V	I	K	S	T	S	F	D	D	G	F	A	I	L	S	S	N	E	A	I	D	C	L	M	F	S	Y	Q	M	E	H	P	D	E	H	Q	N	V	R	Q	L	I	G	K	L	H
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.																														.																	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.																														.																	.	.	.	.	.
Template Sequence		A	R	V	L	V	V	D	D	E	A	N	I	V	.	.	.	.	.	.	.	.	E	L	L	S	V	S	L	K	F	Q	G	F	E	V	Y	T	A	T	N	G	A	Q	A	L	D	R	A	R	E	.	T	R	P	D	A	V	I	L	D	V	X	P	G	X	D	G	.	.	.	.	.	F	G	V	L	R	R	L	R
Template Known Secondary structure									S						.	.	.	.	.	.	.	.										T	T							S	S											.				S									S	S			.	.	.	.	.
Template Predicted Secondary structure															.	.	.	.	.	.	.	.																														.																	.	.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.									.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.						.	80	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	Q	Q	N	V	P	V	F	L	L	G	D	R	E	K	A	L	A	A	M	D	R	D	L	L	E	L	V	D	E	F	A	W	I	L	E	D	T	A	D	F	I	A	G	R	A	V	A	A	M	T	R	Y
Query Conservation
Alig confidence																			.																									.
Template Conservation																			.																									.
Template Sequence		A	D	G	I	D	A	P	A	L	F	L	T	A	R	D	S	L	.	Q	D	K	I	A	G	L	T	L	G	G	D	D	Y	V	T	K	P	F	S	L	E	E	V	.	V	A	R	L	R	V	I	L	R	R	A
Template Known Secondary structure			T	T											S	T	T		.								T	S	T	T						S	S							.
Template Predicted Secondary structure																			.																									.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions