Job Description P28629 Confidence 99.57% Date Wed Jan 25 15:20:47 GMT 2012 Rank 196 Aligned Residues 283 % Identity 15% Template c3p1tB_ PDB info PDB header:transferase Chain: B: PDB Molecule:putative histidinol-phosphate aminotransferase; PDBTitle: crystal structure of a putative aminotransferase (bpsl1724) from2 burkholderia pseudomallei k96243 at 2.60 a resolution Resolution 2.60 Å

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		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		L	D	H	T	G	A	F	G	E	S	E	K	Y	A	A	R	V	F	G	A	D	.	R	S	W	S	V	V	V	G	T	S	G	S	N	R	T	I	M	Q	A	C	M	T	D	N	D	V	V	V	V	D	R	N	C	H	K	S	I	E	Q	G	L	M	L	T	G	A	K	P	V	Y	M	V	P	S	R	N	R	Y
Query Conservation																							.
Alig confidence																							.																					.	.
Template Conservation																																												.	.
Template Sequence		R	Y	P	F	D	A	E	P	R	V	X	R	K	L	A	E	H	F	S	C	P	E	D	N	L	X	L	V	R	G	I	D	E	C	F	D	R	I	S	A	E	F	.	.	S	S	X	R	F	V	T	A	W	P	G	F	D	G	Y	R	A	R	I	A	V	S	G	L	R	H	F	E	I	G	L	T	D	D	L	L
Template Known Secondary structure		S			T	T													T	T	S		G	G	G					S													S	.	.	T	T	S						S	S	S		S										T								B		T	T	S	S
Template Predicted Secondary structure																																												.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	I	G	P	I	Y	P	Q	E	M	Q	P	E	T	L	Q	K	K	I	S	E	S	P	L	T	K	D	K	A	G	Q	K	P	S	Y	C	V	V	T	N	C	T	Y	D	G	V	C	Y	N	A	K	E	A	Q	D	L	L	E	K	T	S	D	R	L	H	F	D	E	A	W	Y	G	Y	A	R	F	N	P	I
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.
Template Sequence		L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	N	D	L	A	Q	V	S	.	.	.	.	.	.	.	.	R	D	D	C	V	V	L	A	N	P	S	N	P	T	G	Q	A	L	S	A	G	E	L	D	Q	L	R	Q	R	A	G	K	L	L	I	D	E	T	Y	V	D	Y	S	S	F	R	A	R
Template Known Secondary structure		B		.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T			.	.	.	.	.	.	.	.	T	T							S	S		T	T	T																	S							T	T	G	G	G	S	S		S	T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.
Template SS confidence
		124	.															.	.	.	.	130	.	.	.									.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		Y	A	D	H	Y	A	M	R	G	E	P	G	D	H	N	G	P	T	V	F	A	T	H	S	T	H	K	L	L	N	.	A	L	S	Q	A	S	Y	I	H	V	R	E	G	R	G	A	I	N	F	S	R	F	N	Q	A	Y	M	M	H	A	T	T	S	P	L	Y	A	I	C	A	S	N	D	V	A	V	S	M	M
Query Conservation																																.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.																			.										.	.	.	.	.	.	.																														.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.																														.	.
Template Sequence		G	.	.	.	.	.	.	.	.	.	.	.	L	A	Y	G	E	N	E	L	V	F	R	S	F	S	K	S	Y	G	L	A	G	L	R	L	G	A	L	F	.	.	.	.	.	.	.	G	P	S	E	L	I	A	A	X	K	R	K	Q	W	F	C	N	V	G	T	L	D	L	H	A	L	E	A	A	.	.	L	D
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.				B	T	T							S	S	S	T	T	S		T	T	T							.	.	.	.	.	.	.											T	T	S		T	T	S	S												.	.		S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.																														.	.
Template SS confidence
		182												.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210								.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.			240	.
		439	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	N	S	G	L	S	L	T	Q	E	V	I	D	E	A	V	D	F	R	Q	A	M	A	R	L	Y	K	E	F	T	A	D	G	S	W	F	F	K	P	W	N	K	E	V	V	T	D	P	Q	T	G	K	T	Y	D	F	A	D	A	P	T	K	L	L	T	T	V	Q	D	C	W	V	M	H	P	G	E	S	W
Query Conservation
Alig confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	D	R	A	R	E	A	H	I	A	K	T	L	A	Q	R	R	R	V	A	D	A	L	R	G	L	G	Y	R	V	A	S	S	E	A	N	F	V	L	V	E	N	A	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																											T	T			B				S	S	S							T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		519	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.					.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.
Query SS confidence																																																										.	.	.	.
Query Sequence		H	G	F	K	D	I	P	D	N	W	S	M	L	D	P	I	K	V	S	I	L	A	P	G	M	G	E	D	G	E	L	E	E	T	G	V	P	A	A	L	V	T	A	W	L	G	R	H	G	I	V	P	T	R	T	T	.	.	.	.	D	F	Q	I	M	F	L	F	S	M	G	V	T	R	G	K	W	G	T	L
Query Conservation																																																										.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.										.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	T	L	R	F	L	R	E	R	G	I	Q	V	K	D	A	G	Q	F	G	L	H	H	H	I	R	I	S	I	G	.	.	.	R	E	E	D	N	D	R	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T						G	G	G	G	T			S								.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.
Template SS confidence
																																								287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.				.	.	320	.	.	.	.	.
		595	.	.	.	.	600	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	T	L	C	S	F	K	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	A	L	A	E	Y	S	D
Template Known Secondary structure									T	T
Template Predicted Secondary structure
Template SS confidence
		326	.	.	.	330	.	.	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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