Job Description P28629 Confidence 99.72% Date Wed Jan 25 15:20:47 GMT 2012 Rank 130 Aligned Residues 212 % Identity 10% Template c3ndnC_ PDB info PDB header:lyase Chain: C: PDB Molecule:o-succinylhomoserine sulfhydrylase; PDBTitle: crystal structure of o-succinylhomoserine sulfhydrylase from2 mycobacterium tuberculosis covalently bound to pyridoxal-5-phosphate Resolution 1.85 Å

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		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.					.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure																																																				.	.	.	.
Query SS confidence																																																				.	.	.	.
Query Sequence		G	E	S	E	K	Y	A	A	R	V	F	G	A	D	R	S	W	S	V	V	V	G	T	S	G	S	N	R	T	I	M	Q	A	C	M	T	D	N	D	V	V	V	V	D	R	N	C	H	K	S	.	.	.	.	I	E	Q	G	L	M	L	T	G	A	K	P	V	Y	M	V	P	S	R	N	R	Y	G	I	I	G
Query Conservation																																																				.	.	.	.
Alig confidence																								.																												.	.	.	.																			.	.	.	.	.	.	.	.
Template Conservation																								.																																																		.	.	.	.	.	.	.	.
Template Sequence		S	V	F	E	E	R	L	R	L	I	E	G	A	P	A	A	F	A	T	A	S	G	.	M	A	A	V	F	T	S	L	G	A	L	L	G	A	G	D	R	L	V	A	A	R	S	L	F	G	S	C	F	V	V	C	S	E	I	L	P	R	W	G	V	Q	T	V	F	V	D	G	D	.	.	.	.	.	.	.	.
Template Known Secondary structure													T		S						S	S		.										T	T			T	T							S	S											T					T	T								T	T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.																																																		.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.		.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		P	I	Y	P	Q	E	M	Q	P	E	T	L	Q	K	K	I	S	E	S	P	L	T	K	D	K	A	G	Q	K	P	S	Y	C	V	V	T	N	C	T	Y	.	D	G	V	C	Y	N	A	K	E	A	Q	D	L	L	E	K	T	S	D	R	L	H	F	D	E	A	W	Y	G	Y	A	R	F	N	P	I	Y	A	D
Query Conservation																																										.
Alig confidence		.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.											.																																					.	.	.
Template Conservation		.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.																																																.	.	.
Template Sequence		.	.	.	.	.	.	.	D	L	S	Q	W	E	R	A	L	S	V	P	T	.	.	.	.	.	.	.	.	.	.	Q	A	V	F	F	E	T	P	S	N	P	M	Q	S	L	V	D	I	A	A	V	T	E	L	A	H	A	A	G	A	K	V	V	L	D	N	V	F	A	T	P	L	L	Q	Q	G	F	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.									T	T	S			.	.	.	.	.	.	.	.	.	.	S						S	S		T	T	T																T	T								T	T	T								G	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.																																																.	.	.
Template SS confidence
									147	.	.	150	.	.	.	.	.	.	.	.	.											160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Y	A	M	R	G	E	P	G	D	H	N	G	P	T	V	F	A	T	H	S	T	H	K	L	L	N	A	L	S	Q	A	S	Y	I	H	V	R	E	G	R	G	A	I	N	F	S	R	F	N	Q	A	Y	M	M	H	A	T	T	S	P	L	Y	A	I	C	A	S	N	D	V	A	V	S	M	M	D	G	N	S
Query Conservation
Alig confidence		.	.	.	.						.	.	.	.	.	.	.																										.	.																																			.	.	.
Template Conservation		.	.	.	.						.	.	.	.	.	.	.																										.	.																																			.	.	.
Template Sequence		.	.	.	.	P	L	G	V	D	.	.	.	.	.	.	.	V	V	V	Y	S	G	T	H	I	D	G	Q	G	R	V	L	G	G	A	I	L	G	D	R	E	.	.	Y	I	D	G	P	V	Q	K	L	M	R	H	T	G	P	A	M	S	A	F	N	A	W	V	L	L	K	G	L	E	T	L	A	I	.	.	.
Template Known Secondary structure		.	.	.	.	G	G	T		S	.	.	.	.	.	.	.										S		S	S													.	.				T																															.	.	.
Template Predicted Secondary structure		.	.	.	.						.	.	.	.	.	.	.																										.	.																																			.	.	.
Template SS confidence
						207	.	.	210	.								.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.			.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		443	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	S	L	T	Q	E	V	I	D	E	A	V	D	F	R	Q	A	M	A	R	L	Y	K	E
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	R	V	Q	H	S	N	A	S	A	Q	R	I	A	E	F	L	N	G	H	P	S	V
Template Known Secondary structure		.	.	.																		T		T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions