Job Description P28629 Confidence 99.73% Date Wed Jan 25 15:20:47 GMT 2012 Rank 128 Aligned Residues 299 % Identity 13% Template c3ly1C_ PDB info PDB header:transferase Chain: C: PDB Molecule:putative histidinol-phosphate aminotransferase; PDBTitle: crystal structure of putative histidinol-phosphate aminotransferase2 (yp_050345.1) from erwinia carotovora atroseptica scri1043 at 1.80 a3 resolution Resolution 1.80 Å

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		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		L	D	H	T	G	A	F	G	E	S	E	K	Y	A	A	R	V	F	G	A	D	R	S	.	W	S	V	V	V	G	T	S	G	S	N	R	T	I	M	Q	A	C	M	T	D	N	D	V	V	V	V	D	R	N	C	H	K	S	I	E	Q	G	L	M	L	T	G	A	K	P	V	Y	M	V	P	S	R	N	R	Y
Query Conservation																									.
Alig confidence																									.																																																								.
Template Conservation																																																																																	.
Template Sequence		R	Y	A	K	N	E	I	L	X	L	G	N	K	L	A	A	H	H	Q	V	E	A	P	S	I	L	L	T	A	G	S	S	E	G	I	R	A	A	I	E	A	Y	A	S	L	E	A	Q	L	V	I	P	E	L	T	Y	G	D	G	E	H	F	A	K	I	A	G	X	K	V	T	K	V	K	X	L	D	N	W	.
Template Known Secondary structure		S																	T	T	S		G	G	G					S																T	T							S	S	S		T									T	T										T	T	S	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.		.	.	.	.	.	.	330	.	.	.	.	.	.	.	.			.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure																																														.																.	.
Query SS confidence																																														.																.	.
Query Sequence		G	I	I	G	P	I	Y	P	Q	E	M	Q	P	E	T	L	Q	K	K	I	S	E	S	P	L	T	K	D	K	A	G	Q	K	P	S	Y	C	V	V	T	N	C	T	Y	.	D	G	V	C	Y	N	A	K	E	A	Q	D	L	L	E	.	.	K	T	S	D	R	L	H	F	D	E	A	W	Y	G	Y	A	R	F
Query Conservation																																														.																.	.
Alig confidence		.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.													.																.	.
Template Conservation		.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	A	F	D	I	E	G	L	K	A	A	V	A	A	Y	S	.	.	.	.	.	.	.	.	G	P	S	I	V	Y	L	V	N	P	N	N	P	T	G	T	I	T	P	A	D	V	I	E	P	W	I	A	S	K	P	A	N	T	X	F	I	V	D	E	A	Y	A	E	F	V	N	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.													T			.	.	.	.	.	.	.	.	S								S	S		T	T	T															T			T	T								T	T	G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Template SS confidence
											166	.	.	.	170	.	.	.	.	.	.	.	.	.	180									.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		N	P	I	Y	A	D	H	Y	A	M	R	G	E	P	G	D	H	N	G	P	T	V	F	A	T	H	S	T	H	K	L	L	N	.	A	L	S	Q	A	S	Y	I	H	V	R	E	G	R	G	A	I	N	F	S	R	F	N	Q	A	Y	M	M	H	A	T	T	S	P	L	Y	A	I	C	A	S	N	D	V	A	V
Query Conservation																																			.
Alig confidence																	.	.	.	.	.														.										.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.																								.	.	.	.	.	.	.
Template Sequence		P	R	F	R	S	I	S	P	X	I	T	Q	G	A	E	.	.	.	.	.	N	I	I	L	L	K	T	F	S	K	I	H	A	X	A	G	X	R	V	G	Y	A	V	.	.	.	.	.	.	.	A	H	P	T	V	I	A	L	X	G	R	Y	V	A	G	E	K	I	N	F	S	G	V	D	A	A	L	A	S	X
Template Known Secondary structure		T	T				S						T	T		S	.	.	.	.	.	S							S	S	S	T	T			G	G	G							.	.	.	.	.	.	.											T	T	T	T	S	S
Template Predicted Secondary structure																	.	.	.	.	.																								.	.	.	.	.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.						.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.								.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	M	M	D	G	N	S	G	L	S	L	T	Q	E	V	I	D	E	A	V	D	F	R	Q	A	M	A	R	L	Y	K	E	F	T	A	D	G	S	W	F	F	K	P	W	N	K	E	V	V	T	D	P	Q	T	G	K	T	Y	D	F	A	D	A	P	T	K	L	L	T	T	V	Q	D	C	W	V	M	H	P	G
Query Conservation
Alig confidence								.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	D	S	A	F	I	.	.	T	Y	S	K	K	S	N	D	V	S	R	Q	I	L	L	K	A	L	E	D	L	K	L	P	Y	L	P	S	E	G	N	F	V	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								.	.																						T			B					S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure								.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		297	.	.	300	.	.			.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
		516	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.		.	.	.	.	.	.	.	.	590	.	.	.	.
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		E	S	W	H	G	F	K	D	I	P	D	N	W	S	M	L	D	P	I	K	V	S	I	L	A	P	G	M	G	E	D	G	E	L	E	E	T	G	V	P	A	A	L	V	T	A	W	L	G	R	H	G	I	V	P	T	R	T	T	D	F	Q	I	M	F	L	.	F	S	M	G	V	T	R	G	K	W	G	T	L
Query Conservation																																																																				.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.					.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	Q	L	V	V	P	L	K	D	Y	Q	T	H	X	A	D	A	G	V	L	I	G	R	A	F	P	P	A	D	N	W	C	R	I	S	L	G	.	T	P	Q	E	X	Q	W	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S												T	T								T	T		T	T								.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.
Template SS confidence
																																				337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.		.	.	.	.	.	.	380	.
		595	.	.	.	.	600	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	T	L	C	S	F	K	R	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	T	X	R	E	F	R	K	K
Template Known Secondary structure											T
Template Predicted Secondary structure
Template SS confidence
		382	.	.	.	.	.	.	.	390	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions