Job Description P28629 Confidence 99.39% Date Wed Jan 25 15:20:47 GMT 2012 Rank 223 Aligned Residues 245 % Identity 12% Template c3k7yA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aspartate aminotransferase; PDBTitle: aspartate aminotransferase of plasmodium falciparum Resolution 2.80 Å

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		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.										.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.																						.
Query SS confidence																										.	.	.	.	.	.	.	.	.																						.
Query Sequence		L	D	H	T	G	A	F	G	E	S	E	K	Y	A	A	R	V	F	G	A	D	R	S	W	.	.	.	.	.	.	.	.	.	S	V	V	V	G	T	S	G	S	N	R	T	I	M	Q	A	C	M	T	D	N	.	D	V	V	V	V	D	R	N	C	H	K	S	I	E	Q	G	L	M	L	T	G	A	K	P	V
Query Conservation																										.	.	.	.	.	.	.	.	.																						.
Alig confidence																										.	.	.	.	.	.	.	.	.																						.
Template Conservation
Template Sequence		Y	L	L	G	N	G	T	E	D	F	S	T	L	T	Q	N	L	I	F	G	N	N	S	K	Y	I	E	D	K	K	I	C	T	I	Q	C	I	G	G	T	G	A	I	F	V	L	L	E	F	L	K	M	L	N	V	E	T	L	Y	V	T	N	P	P	Y	I	N	H	V	N	M	I	E	S	R	G	F	N	L	K
Template Known Secondary structure				T	T	S	S															S	S		T	T	T	T	T	T																							T	T	T								S	S											T	T	T
Template Predicted Secondary structure
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.		.	.	.	.	.	.	.				.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure																																																					.								.	.	.
Query SS confidence																																																					.								.	.	.
Query Sequence		Y	M	V	P	S	R	N	R	Y	G	I	I	G	P	I	Y	P	Q	E	M	Q	P	E	T	L	Q	K	K	I	S	E	S	P	L	T	K	D	K	A	G	Q	K	P	S	Y	C	V	V	T	N	C	.	T	Y	D	G	V	C	Y	.	.	.	N	A	K	E	A	Q	D	L	L	E	K	T	S	D	R	L	H	F
Query Conservation																																																					.								.	.	.
Alig confidence														.	.	.	.	.	.	.	.														.	.	.	.	.	.	.												.								.	.	.
Template Conservation														.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Template Sequence		Y	I	N	F	F	D	Y	N	L	I	D	I	.	.	.	.	.	.	.	.	N	Y	D	L	F	L	N	D	L	R	N	I	P	.	.	.	.	.	.	.	N	G	S	S	V	I	L	Q	I	S	C	Y	N	P	C	S	V	N	I	E	E	K	Y	F	D	E	I	I	E	I	V	L	H	K	K	H	V	I	I	F
Template Known Secondary structure								T	T	T	T			.	.	.	.	.	.	.	.												S		.	.	.	.	.	.	.	S	S								S	S		T	T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.									160	.	.	.	.	.	.	.	.	.	170	.	.								.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.			.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure																																												.	.
Query SS confidence																																												.	.
Query Sequence		D	E	A	W	Y	G	Y	A	R	F	N	P	I	Y	A	D	H	Y	A	M	R	G	E	P	G	D	H	N	G	P	T	V	F	A	T	H	S	T	H	K	L	L	.	.	N	A	L	S	Q	A	S	Y	I	H	V	R	E	G	R	G	A	I	N	F	S	R	F	N	Q	A	Y	M	M	H	A	T	T	S	P	L
Query Conservation																																												.	.
Alig confidence					.	.	.																																					.	.																.	.
Template Conservation					.	.	.																																																						.	.
Template Sequence		D	I	A	.	.	.	Y	Q	G	F	G	H	T	N	L	E	E	D	V	L	L	I	R	K	F	E	E	K	N	I	A	F	S	V	C	Q	S	F	S	K	N	M	S	L	Y	G	E	R	A	G	A	L	H	I	V	C	K	N	Q	.	.	E	E	K	K	I	V	F	N	N	L	C	F	I	V	R	K	F	Y	S
Template Known Secondary structure				S	.	.	.		T	T	T	S	S	S	S	T	T	G	G	G								T	T	T										T	T	T	S			T	T	T	T									S	S		.	.																T	T	T	S
Template Predicted Secondary structure					.	.	.																																																						.	.
Template SS confidence
		213	.	.				.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.			.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		425	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	I	C	A	S	N	D	V	A	V	S	M	M	D	G	N	S	G	L	S	L	T	Q	E	V	I	D	E	A	V	D	F	R	Q	A	M	A	R	L	Y	K	E	F
Query Conservation
Alig confidence																	.	.	.
Template Conservation																	.	.	.
Template Sequence		S	P	V	I	H	T	N	R	I	L	C	Q	L	L	N	.	.	.	N	Q	N	L	K	L	N	W	I	K	E	L	S	Q	L	S	Q	R	I	T	N	N	R	I	L	F
Template Known Secondary structure		S															.	.	.
Template Predicted Secondary structure																	.	.	.
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.				.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions