Job Description P28629 Confidence 48.61% Date Wed Jan 25 15:20:47 GMT 2012 Rank 477 Aligned Residues 108 % Identity 7% Template c3fwzA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:inner membrane protein ybal; PDBTitle: crystal structure of trka-n domain of inner membrane protein ybal from2 escherichia coli Resolution 1.79 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	V	L	I	V	E	S	E	F	L	H	Q	D	T	W	V	G	N	A	V	E	R	L	A	D	A	L	S	Q	Q	N	V	T	V	I	K	S	T	S	F	D	D	G	F	A	I	L	S	S	N	E	A	I	D	C	L	M	F	S	Y	Q	M	E	H	P	D	E	H	Q	N	V	R	Q	L	I	G	K	L	H
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.
Template Sequence		I	P	L	V	V	I	E	T	S	.	.	.	.	.	.	.	.	.	.	.	.	R	T	R	V	D	E	L	R	E	R	G	V	R	A	V	L	G	N	A	A	N	E	E	I	X	Q	L	A	H	L	E	C	A	K	W	L	I	L	T	.	.	.	.	.	I	P	N	G	Y	E	A	G	E	I	V	A	S	A	R
Template Known Secondary structure									S		.	.	.	.	.	.	.	.	.	.	.	.										T	T						S		T	T	S							T	T	G	G	G		S						.	.	.	.	.		S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.
Template SS confidence
		441	.	.	.	.	.	.	.	.													450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.						.	490	.	.	.	.	.	.	.	.	.	500	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	Q	Q	N	V	P	V	F	L	L	G	D	R	E	K	A	L	A	A	M	D	R	D	L	L	E	L	V	D	E	F	A	W	I	L	E	D	T	A	D	F	I	A	G	R	A	V
Query Conservation
Alig confidence																	.	.	.
Template Conservation																	.	.	.
Template Sequence		A	K	N	P	D	I	E	I	I	A	R	A	H	Y	D	.	.	.	D	E	V	A	Y	I	T	E	R	G	A	N	Q	V	V	X	G	E	R	E	I	A	R	T	X	L	E	L	L	E
Template Known Secondary structure					S	S	S							S	S		.	.	.									T	T		S
Template Predicted Secondary structure																	.	.	.
Template SS confidence
		504	.	.	.	.	.	510	.	.	.	.	.	.	.	.				.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions