Job Description P28629 Confidence 99.63% Date Wed Jan 25 15:20:47 GMT 2012 Rank 175 Aligned Residues 228 % Identity 16% Template c3fd0B_ PDB info PDB header:lyase Chain: B: PDB Molecule:putative cystathionine beta-lyase involved in aluminum PDBTitle: crystal structure of putative cystathionine beta-lyase involved in2 aluminum resistance (np_470671.1) from listeria innocua at 2.12 a3 resolution Resolution 2.12 Å

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		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.			.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.																							.
Query SS confidence																								.	.																							.
Query Sequence		E	K	Y	A	A	R	V	F	G	A	D	R	S	W	S	V	V	V	G	T	S	G	.	.	S	N	R	T	I	M	Q	A	C	M	T	D	N	D	V	V	V	V	D	R	N	C	.	H	K	S	I	E	Q	G	L	M	L	T	G	A	K	P	V	Y	M	V	P	S	R	N	R	Y	G	I	I	G	P	I	Y	P
Query Conservation																								.	.																							.
Alig confidence																								.	.																							.
Template Conservation
Template Sequence		E	R	V	Y	A	S	V	F	K	T	E	A	A	L	V	R	P	Q	I	I	S	G	T	H	A	I	S	T	V	L	F	G	I	L	R	P	G	D	E	L	L	Y	I	T	G	E	P	Y	D	T	L	E	E	I	V	G	I	R	S	E	G	Q	G	S	L	K	D	F	Q	I	G	Y	D	A	V	P	L	L	P	N
Template Known Secondary structure										T		S						T	T	S		S															T	T							S	S	S			T	T						T	S	S		S	S	S			T	G	G	G	T										T	T
Template Predicted Secondary structure
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.						.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.			.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure																																							.	.	.	.	.																		.	.
Query SS confidence																																							.	.	.	.	.																		.	.
Query Sequence		Q	E	M	Q	P	E	T	L	Q	K	K	I	S	E	S	P	L	T	K	D	K	A	G	Q	K	P	S	Y	C	V	V	T	N	C	T	Y	D	.	.	.	.	.	G	V	C	Y	N	A	K	E	A	Q	D	L	L	E	K	T	S	.	.	D	R	L	H	F	D	E	A	W	Y	G	Y	A	R	F	N	P	I	Y
Query Conservation																																							.	.	.	.	.																		.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.												.	.	.	.	.																		.	.															.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.
Template Sequence		G	E	I	D	Y	P	A	V	S	K	K	I	S	A	N	T	.	.	.	.	.	.	.	.	.	.	K	X	I	G	I	Q	R	S	R	G	Y	A	D	R	P	S	F	T	I	E	K	I	K	E	X	V	T	F	V	K	N	I	N	P	N	I	I	V	F	V	D	N	C	Y	G	E	F	V	E	.	.	.	.	.
Template Known Secondary structure		S	S												T	T		.	.	.	.	.	.	.	.	.	.								S		T	T	S	S	S																				T	T	S							T	T	T	T	T	T	S	.	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.											160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.		.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		A	D	H	Y	A	M	R	G	E	P	G	D	H	N	G	P	T	V	F	A	T	H	S	T	H	K	L	L	N	A	L	.	S	Q	A	S	Y	I	H	V	R	E	G	R	G	A	I	N	F	S	R	F	N	Q	A	Y	M	M	H	A	T	T	S	P	L	Y	A	I	C	A	S	N	D	V	A	V	S	M	M	D
Query Conservation																																	.
Alig confidence		.											.	.	.	.	.	.	.														.								.	.	.	.	.	.	.
Template Conservation		.											.	.	.	.	.	.	.																						.	.	.	.	.	.	.
Template Sequence		.	R	I	E	P	T	E	V	G	A	D	.	.	.	.	.	.	.	I	I	A	G	S	L	I	N	P	G	G	G	L	A	K	T	G	G	Y	I	A	.	.	.	.	.	.	.	G	R	N	T	L	V	D	L	C	G	Y	R	L	T	T	P	G	I	G	R	E	A	G	A	S	L	Y	S	L	L	E	X	Y	Q
Template Known Secondary structure		.	S			G	G	G	T	T		S	.	.	.	.	.	.	.									T	T	T	T	T			S						.	.	.	.	.	.	.														S		T	T	T	G	G	G					T	T
Template Predicted Secondary structure		.											.	.	.	.	.	.	.																						.	.	.	.	.	.	.
Template SS confidence
			209	210	.	.	.	.	.	.	.	.								.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.								240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	S	G	L	S	L	T	Q	E	V	I	D	E	A	V	D	F	R	Q	A	M	A	R	L	Y	K	E	F	T	A	D
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	G	F	F	L	A	P	H	V	T	A	Q	A	I	K	G	A	R	F	T	A	A	X	L	A	E	F	G	V	E
Template Known Secondary structure		.	.	.																										T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions