Job Description P28629 Confidence 99.97% Date Wed Jan 25 15:20:47 GMT 2012 Rank 16 Aligned Residues 297 % Identity 18% Template c3ecdC_ PDB info PDB header:transferase Chain: C: PDB Molecule:serine hydroxymethyltransferase 2; PDBTitle: crystal structure of serine hydroxymethyltransferase from burkholderia2 pseudomallei Resolution 1.60 Å

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		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	G	E	S	E	K	Y	A	A	R	V	F	G	A	D	R	S	W	S	V	V	V	G	T	S	G	S	N	R	T	I	M	Q	A	C	M	T	D	N	D	V	V	V	V	D	R	N	C	H	K	S	I	E	Q	G	L	M	L	T	G	A	K	P	V	Y	M	V	P	S	R	N	R	Y	G	I	I	G	P	I
Query Conservation
Alig confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.
Template Sequence		V	E	A	L	A	I	E	R	V	K	R	L	F	N	A	G	H	A	N	V	Q	P	H	S	G	A	Q	A	N	G	A	V	M	L	A	L	A	K	P	G	D	T	V	L	G	M	S	L	F	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	Q	Y	G	V	S	R	D	T	M	L	I	.	.	.
Template Known Secondary structure														T	T		S							S	S															T	T											.	.	.	.	.	.	.	.	.	.	.	.	.	.						B		T	T	T		S	B	.	.	.
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.															.	.	130	.	.	.	.	.	.	.	.	.	140
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	P	Q	E	M	Q	P	E	T	L	Q	K	K	I	S	E	S	P	L	T	K	D	K	A	G	Q	K	P	S	Y	C	V	V	T	N	C	T	Y	D	G	V	C	Y	N	A	K	E	A	Q	D	L	L	E	K	T	S	D	R	L	H	F	D	E	A	W	Y	G	Y	A	R	F	N	P	I	Y	A	D	H	Y	A
Query Conservation
Alig confidence		.	.	.	.	.														.	.	.	.	.	.	.	.	.	.																																																.
Template Conservation		.	.	.	.	.														.	.	.	.	.	.	.	.	.	.																																																.
Template Sequence		.	.	.	.	.	D	Y	D	Q	V	E	A	L	A	Q	Q	H	K	.	.	.	.	.	.	.	.	.	.	P	S	L	I	I	A	G	F	S	A	Y	P	R	K	L	D	F	A	R	F	R	A	I	A	D	S	V	G	A	K	L	M	V	D	M	A	H	I	A	G	V	I	A	A	G	R	H	.	A	N	P	V
Template Known Secondary structure		.	.	.	.	.														.	.	.	.	.	.	.	.	.	.		S							S			S	S														T	T								T	T	T						T	T	S	S	.			G	G
Template Predicted Secondary structure		.	.	.	.	.														.	.	.	.	.	.	.	.	.	.																																																.
Template SS confidence
							159	160	.	.	.	.	.	.	.	.	.	170	.											.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	G	E	P	G	D	H	N	G	P	T	V	F	A	T	H	S	T	H	K	L	L	N	A	L	S	Q	A	S	Y	I	H	V	R	E	G	R	G	A	I	N	F	S	R	F	N	Q	A	Y	M	M	H	A	T	T	S	P	L	Y	A	I	C	A	S	N	D	V	A	V	S	M	M	D	G	N	S	G	L	S
Query Conservation
Alig confidence			.	.				.	.	.	.	.	.	.													.												.	.	.	.	.	.	.	.	.
Template Conservation			.	.				.	.	.	.	.	.	.													.												.	.	.	.	.	.	.	.	.
Template Sequence		E	.	.	H	A	H	.	.	.	.	.	.	.	V	V	T	S	T	T	H	K	T	L	R	G	.	P	R	G	G	F	V	L	T	N	D	E	.	.	.	.	.	.	.	.	.	E	I	A	K	K	I	N	S	A	V	G	P	L	M	H	V	I	A	G	K	A	V	A	F	G	E	A	L	T	D	D	F	K	T
Template Known Secondary structure		G	.	.	T		S	.	.	.	.	.	.	.						S	S	G	G	G		S	.		S							S			.	.	.	.	.	.	.	.	.																												T	S
Template Predicted Secondary structure			.	.				.	.	.	.	.	.	.													.												.	.	.	.	.	.	.	.	.
Template SS confidence
		223			.	.	.								.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.										250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		446	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	Q	E	V	I	D	E	A	V	D	F	R	Q	A	M	A	R	L	Y	K	E	F	T	A	D	G	S	W	F	F	K	P	W	N	K	E	V	V	T	D	P	Q	T	G	K	T	Y	D	F	A	D	A	P	T	K	L	L	T	T	V	Q	D	C	W	V	M	H	P	G	E	S	W	H	G	F	K	D	I	P
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	I	D	R	V	L	A	N	A	Q	A	L	G	D	V	L	K	A	G	G	V	D	L	V	T	G	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																				T	T				G	G	G	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		526	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.															.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	N	W	S	M	L	D	P	I	K	V	S	I	L	A	P	G	M	G	E	D	G	E	L	E	E	T	G	V	P	A	A	L	V	T	A	W	L	G	R	H	G	I	V	P	T	R	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	F	Q	I	M	F	L	F	S	M	G	V	T	R	G	K	W
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	D	N	H	L	L	L	V	D	L	R	P	K	G	L	K	G	.	.	.	.	.	.	.	.	.	A	Q	V	E	Q	A	L	E	R	A	G	I	T	C	N	K	N	G	I	P	F	D	P	E	K	P	T	I	T	S	G	I	R	L	G	T	P	A	G	T	T	R	G	F	G	A	A	E	F
Template Known Secondary structure		.	.	.	.	.	.	S	S	S							G	G	G	T				.	.	.	.	.	.	.	.	.										T	T									T	T		S	S		T	T	T		S												T	T
Template Predicted Secondary structure		.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Template SS confidence
								318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.										.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
		592	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	L	V	N	T	L	C	S	F	K	R	H	Y	D	A	N	T	P	L	A	Q	V	M	P	E	L	V	E	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	E	V	G	R	L	I	L	E	V	F	E	A	L	R	T	N	P	E	G	D	H	A	T	E	Q	R	V	R	R
Template Known Secondary structure																T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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