Job Description P28629 Confidence 99.69% Date Wed Jan 25 15:20:47 GMT 2012 Rank 146 Aligned Residues 225 % Identity 13% Template c3e6gA_ PDB info PDB header:lyase Chain: A: PDB Molecule:cystathionine gamma-lyase-like protein; PDBTitle: crystal structure of xometc, a cystathionine c-lyase-like2 protein from xanthomonas oryzae pv.oryzae Resolution 2.80 Å

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		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	L	L	D	H	T	G	A	F	G	E	S	E	K	Y	A	A	R	V	F	G	A	D	R	S	W	S	V	V	V	G	T	S	G	S	N	R	T	I	M	Q	A	C	M	T	D	N	D	V	V	V	V	D	R	N	C	H	K	S	I	E	Q	G	L	M	L	T	G	A	K	P	V	Y	M	V	P	S	R	N
Query Conservation
Alig confidence									.	.																								.	.																																														.
Template Conservation									.	.																								.	.																																														.
Template Sequence		S	S	T	H	N	P	T	.	.	R	F	A	Y	E	R	C	V	A	A	L	E	G	G	T	R	A	F	A	F	A	S	G	.	.	M	A	A	T	S	T	V	M	E	L	L	D	A	G	S	H	V	V	A	M	D	D	L	Y	G	G	T	F	R	L	F	E	R	V	R	R	R	T	A	G	L	D	F	S	F	.
Template Known Secondary structure									.	.													T		S						S	S		.	.									T	T	S		T	T							S	S																								.
Template Predicted Secondary structure									.	.																								.	.																																														.
Template SS confidence
		48	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.		.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		R	Y	G	I	I	G	P	I	Y	P	Q	E	M	Q	P	E	T	L	Q	K	K	I	S	E	S	P	L	T	K	D	K	A	G	Q	K	P	S	Y	C	V	V	T	N	C	T	Y	D	.	G	V	C	Y	N	A	K	E	A	Q	D	L	L	E	K	T	S	D	R	L	H	F	D	E	A	W	Y	G	Y	A	R	F
Query Conservation																																																	.
Alig confidence		.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.												.
Template Conservation		.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	V	D	L	T	D	P	A	A	F	K	A	A	I	R	A	D	T	.	.	.	.	.	.	.	.	.	.	K	M	V	W	I	E	T	P	T	N	P	M	L	K	L	V	D	I	A	A	I	A	V	I	A	R	K	H	G	L	L	T	V	V	D	N	T	F	A	S	P	M	L	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.	.			T	T											T	T		.	.	.	.	.	.	.	.	.	.							S	S		T	T	T																T	T								S	S	S		T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
											134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150											.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	I	Y	A	D	H	Y	A	M	R	G	E	P	G	D	H	N	G	P	T	V	F	A	T	H	S	T	H	K	L	L	N	A	L	S	Q	A	S	Y	I	H	V	R	E	G	R	G	A	I	N	F	S	R	F	N	Q	A	Y	M	M	H	A	T	T	S	P	L	Y	A	I	C	A	S	N	D	V	A	V	S
Query Conservation
Alig confidence				.	.	.	.	.	.	.							.	.	.	.	.	.	.																																														.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.							.	.	.	.	.	.	.																																														.	.	.	.	.	.
Template Sequence		R	P	.	.	.	.	.	.	.	L	S	L	G	A	D	.	.	.	.	.	.	.	L	V	V	H	S	A	T	K	Y	L	N	G	H	S	D	M	V	G	G	I	A	V	V	G	D	N	A	E	L	A	E	Q	M	A	F	L	Q	N	S	I	G	G	V	Q	G	.	.	.	.	.	.	P	F	D	S	F	L	A
Template Known Secondary structure			G	.	.	.	.	.	.	.	G	G	G	T		S	.	.	.	.	.	.	.						T	T	T	T	T	T		S	S	S										S																		B			.	.	.	.	.	.
Template Predicted Secondary structure				.	.	.	.	.	.	.							.	.	.	.	.	.	.																																														.	.	.	.	.	.
Template SS confidence
		195	.								.	.	.	200	.	.								.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.							.	.	250	.	.	.	.
		437	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	M	D	G	N	S	G	L	S	L	T	Q	E	V	I	D	E	A	V	D	F	R	Q	A	M	A	R	L	Y	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	G	L	K	T	L	P	L	R	M	R	A	H	C	E	N	A	L	A	L	A	Q	W	L	E	T	H	P	A
Template Known Secondary structure						T	T																					T		T	T
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions