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Job DescriptionP28629
Confidence99.73%DateWed Jan 25 15:20:47 GMT 2012
Rank127Aligned Residues354
% Identity13%Templatec3e2yB_
PDB info PDB header:transferase, lyaseChain: B: PDB Molecule:kynurenine-oxoglutarate transaminase 3; PDBTitle: crystal structure of mouse kynurenine aminotransferase iii in complex2 with glutamine
Resolution2.26 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   165....170.........180.........190.........200.........210....... ..220.........230.......
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Query Sequence  GVGFTKTPAGRFYHDYYGENLFRTDMGIERTSLGSLLDHTGAFGESEKYAARV. . . . . . . FGADRSWSVVVGTSGSNRTI
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Template Sequence  GQGFPDISPPSYVKEELSKAAFIDNMN. . . . . . . QYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNS
Template Known Secondary structure  SS



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TSGGGG.......S


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   70.........80.........90...... ...100.........110.........120.........130.........140..
 
   238.240.........250.........260.........270.........280........ .290.........300.........310......
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Query Sequence  MQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRNRYGIIGPIYPQ. EMQPETLQKKISESPLTKDKAGQKPSYC
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Template Sequence  IQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKT. . . . . . . . . . KAI
Template Known Secondary structure 

TT
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BGGG



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   143......150.........160.........170.........180.........190.........200......... 210..
 
   317..320... ...... 330.........340.........350.........360.........370.........380......... 390.
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Query Sequence  VVTNCTY. DGVCYN. . . AKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLN. AL
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Template Sequence  ILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWE. . . . . RTITIGSAGKTFSVTG
Template Known Secondary structure  SS
TTT




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TTTT
B
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GGGSTTTGG.....GSS
GG
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   213......220.........230.........240.........250.........260.........270. ........280.......
 
   392.......400.........410.........420.........430.........440 .........450.........460......
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Query Sequence  SQASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDVAVSMMDG. . . . . NSGLSLTQEVIDEAVDFRQAMARLYK
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Template Sequence  WKLGWSIGPAHL. . . . IKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSVGL
Template Known Secondary structure  G



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   288.290......... 300.........310.........320.........330.........340.........350.........360...
 
   467..470.........480.........490.........500.........510.........520.........530.........540......
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Query Sequence  EFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGED
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Template Sequence  KPIVPDGGYF. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . IIADVSSLGAD
Template Known Secondary structure  B
SBSS...........................................................
TTS


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   364.....370... ......380....
 
   547..550.... .....560.........570......... 580.........590.........600...
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Query Sequence  GELEETGV. . PAALVTAWLGRHGIVPTRTTDFQIM. . . . . . . . . FLFSMGVTRGKWGTLVNTLCSFKR
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Template Sequence  LSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFIKKDSTLDAAEEIFRAWNQ
Template Known Secondary structure 
TTT


S
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GGGGS
TTTTT



T


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   385....390.........400.........410.........420.........430.........440.........450..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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