Job Description P28629 Confidence 97.78% Date Wed Jan 25 15:20:47 GMT 2012 Rank 292 Aligned Residues 121 % Identity 12% Template c3cu5B_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:two component transcriptional regulator, arac family; PDBTitle: crystal structure of a two component transcriptional regulator arac2 from clostridium phytofermentans isdg Resolution 2.60 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.				.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.
Query SS confidence																																			.	.	.
Query Sequence		M	K	V	L	I	V	E	S	E	F	L	H	Q	D	T	W	V	G	N	A	V	E	R	L	A	D	A	L	S	Q	Q	N	V	.	.	.	T	V	I	K	S	T	S	F	D	D	G	F	A	I	L	S	S	N	E	A	I	D	C	L	M	F	S	Y	Q	M	E	H	P	D	E	H	Q	N	V	R	Q	L	I	G
Query Conservation																																			.	.	.
Alig confidence															.	.	.	.	.	.	.	.													.	.	.																			.																.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.																																		.																.	.	.	.
Template Sequence		L	R	I	L	I	V	D	D	E	K	L	T	R	.	.	.	.	.	.	.	.	D	G	L	I	A	N	I	N	W	K	A	L	S	F	D	Q	I	D	Q	A	D	D	G	I	N	A	I	Q	I	A	L	K	H	.	P	P	N	V	L	L	T	D	V	R	M	P	R	M	D	.	.	.	.	G	I	E	L	V	D
Template Known Secondary structure									S						.	.	.	.	.	.	.	.						T	S		T	T	T	S									S	S											S	.			S						S			T	T	S		.	.	.	.
Template Predicted Secondary structure															.	.	.	.	.	.	.	.																																		.																.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.									.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.					.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	H	E	R	Q	Q	N	V	P	V	F	L	L	G	D	R	E	K	A	L	A	A	M	D	R	D	L	L	E	L	V	D	E	F	A	W	I	L	E	D	T	A	D	F	I	A	G	R	A	V	A	A	M	T	R	Y	R	Q
Query Conservation
Alig confidence																						.																									.
Template Conservation																						.																									.
Template Sequence		N	I	L	K	L	Y	P	D	C	S	V	I	F	M	S	G	Y	S	D	K	.	E	Y	L	K	A	A	I	K	F	R	A	I	R	Y	V	E	K	P	I	D	P	S	E	I	.	M	D	A	L	K	Q	S	I	Q	T	V	L	Q
Template Known Secondary structure								T	T									T	T			.									S	S							S	S			T	T			.
Template Predicted Secondary structure																						.																									.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions