Job Description P28629 Confidence 44.74% Date Wed Jan 25 15:20:47 GMT 2012 Rank 489 Aligned Residues 102 % Identity 12% Template c3crw1_ PDB info PDB header:hydrolase Chain: 1: PDB Molecule:xpd/rad3 related dna helicase; PDBTitle: "xpd_apo" Resolution 4.00 Å

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		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		G	E	S	E	K	Y	A	A	R	V	F	G	A	D	R	S	W	S	V	V	V	G	T	S	G	S	N	.	R	T	I	M	Q	A	C	M	T	D	N	D	V	V	V	V	D	R	N	C	H	K	S	I	E	Q	G	L	M	L	T	G	A	K	P	V	Y	M	V	P	S	R	N	R	Y	G	I	I	G	P	I	Y
Query Conservation																													.
Alig confidence																													.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.
Template Sequence		E	K	L	K	D	K	V	I	E	G	L	R	N	N	F	L	V	A	L	N	A	P	T	G	S	G	K	T	L	F	S	L	L	V	S	L	E	V	K	P	K	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	F	V	V	R	T	H	N	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														T	T									S	S	S	S										T	T	T		S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S	S	G	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50																						.	.	.	.	.	.	.	.
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.																				.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	Q	E	M	Q	P	E	T	L	Q	K	K	I	S	E	S	P	L	T	K	D	K	A	G	Q	K	P	S	Y	C	V	V	T	N	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	Y	D	G	V	C	Y	N	A	K	E	A	Q	D	L	L	E	K	T	S	D	R	L	H	F	D
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.														.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.														.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	E	F	Y	P	I	Y	R	D	L	T	K	I	R	.	.	.	.	.	.	.	.	E	I	T	F	S	F	L	V	G	K	P	S	S	C	L	E	S	E	N	S	L	Y	K	A	D	V	I	A	L	T	Y	P	Y	F	F	I	D	R	Y	R	E	F	I	D	I	D	L	R	E	Y	M	I	V	I	D
Template Known Secondary structure		.	.	.	.	G	G									S			.	.	.	.	.	.	.	.										S	T	T	T							T	T	T	T		S						T										T	T	S				S	T	T
Template Predicted Secondary structure		.	.	.	.														.	.	.	.	.	.	.	.
Template SS confidence
						59	60	.	.	.	.	.	.	.	.	.	70	.									.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		348	.	350	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	W	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	H	N
Template Known Secondary structure		T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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