Job Description P28629 Confidence 99.65% Date Wed Jan 25 15:20:47 GMT 2012 Rank 166 Aligned Residues 292 % Identity 12% Template c3cq6E_ PDB info PDB header:transferase Chain: E: PDB Molecule:histidinol-phosphate aminotransferase; PDBTitle: histidinol-phosphate aminotransferase from corynebacterium2 glutamicum holo-form (plp covalently bound ) Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.								220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.
Query Sequence		H	T	G	A	F	G	E	S	E	K	Y	A	A	R	V	F	G	.	.	.	.	.	.	.	A	D	R	S	W	S	V	V	V	G	T	S	G	S	N	R	T	I	M	Q	A	C	M	T	D	N	D	V	V	V	V	D	R	N	C	H	K	S	I	E	Q	G	L	M	L	T	G	A	K	P	V	Y	M	V	P	S
Query Conservation																			.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	E	R	D	A	V	E	L	R	D	E	L	A	A	Y	I	T	K	Q	T	G	V	A	V	T	R	D	N	L	W	A	A	N	G	S	N	E	I	L	Q	Q	L	L	Q	A	F	G	G	P	G	R	T	A	L	G	F	Q	P	S	Y	S	M	H	P	I	L	A	K	G	T	H	T	E	F	I	A	V	S	R	G
Template Known Secondary structure				T	T																	S					G	G	G					S														S		T	T								S			T									T	T
Template Predicted Secondary structure
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	R	Y	G	I	I	G	P	I	Y	P	Q	E	M	Q	P	E	T	L	Q	K	K	I	S	E	S	P	L	T	K	D	K	A	G	Q	K	P	S	Y	C	V	V	T	N	C	T	Y	D	G	V	C	Y	N	A	K	E	A	Q	D	L	L	E	K	T	S	D	R	L	H	F	D	E	A	W	Y	G	Y	A	R
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.																																							.
Template Conservation					.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.																																							.
Template Sequence		A	D	F	.	.	.	.	.	.	.	.	.	.	R	I	D	M	D	V	A	L	E	E	I	R	A	K	Q	.	.	.	.	.	.	.	.	P	D	I	V	F	V	T	T	P	N	N	P	T	G	D	V	T	S	L	D	D	V	E	R	I	I	N	V	A	P	G	I	V	I	V	D	E	A	.	Y	A	E	F	S
Template Known Secondary structure		T	T	S	.	.	.	.	.	.	.	.	.	.	S															.	.	.	.	.	.	.	.		S						S	S		T	T	T																	S	S							T	.	T	G	G	G
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.																																							.
Template SS confidence
		144	.	.											.	.	.	150	.	.	.	.	.	.	.	.	.	160	.									.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	N	P	I	Y	A	D	H	Y	A	M	R	G	E	P	G	D	H	N	G	P	T	V	F	A	T	H	S	T	H	K	L	L	N	A	L	S	Q	A	S	Y	I	H	V	R	E	G	R	G	A	I	N	F	S	R	F	N	Q	A	Y	M	M	H	A	T	T	S	P	L	Y	A	I	C	A	S	N	D	V	A	V
Query Conservation
Alig confidence							.											.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Conservation							.											.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Sequence		P	S	P	S	A	.	T	T	L	L	E	K	Y	P	T	K	.	.	.	.	.	.	.	L	V	V	S	R	T	M	S	A	F	D	F	A	G	G	R	L	G	Y	F	V	.	.	.	.	.	.	A	N	P	A	F	I	D	A	V	M	L	V	R	L	P	Y	H	L	S	A	L	S	Q	A	A	A	I	V	A	L
Template Known Secondary structure		S	S			G	.	G	G	G	T	T	T		T	T	T	.	.	.	.	.	.	.											S		G	G	G							.	.	.	.	.	.										T	T	T	S		T	T		S
Template Predicted Secondary structure							.											.	.	.	.	.	.	.																						.	.	.	.	.	.
Template SS confidence
		205	.	.	.	.		210	.	.	.	.	.	.	.	.	.								220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240							.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	M	M	D	G	N	S	G	L	S	L	T	Q	E	V	I	D	E	A	V	D	F	R	Q	A	M	A	R	L	Y	K	E	F	T	A	D	G	S	W	F	F	K	P	W	N	K	E	V	V	T	D	P	Q	T	G	K	T	Y	D	F	A	D	A	P	T	K	L	L	T	T	V	Q	D	C	W	V	M	H	P	G
Query Conservation
Alig confidence								.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	H	S	A	D	T	.	.	L	G	T	V	E	K	L	S	V	E	R	V	R	V	A	A	R	L	E	E	L	G	Y	A	V	V	P	S	E	S	N	F	V	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T					.	.	T	T																				T							S	S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure								.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		272	.	.	.	.	.			.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		516	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570		.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		E	S	W	H	G	F	K	D	I	P	D	N	W	S	M	L	D	P	I	K	V	S	I	L	A	P	G	M	G	E	D	G	E	L	E	E	T	G	V	P	A	A	L	V	T	A	W	L	G	R	H	G	I	V	P	.	T	R	T	T	D	F	Q	I	M	F	L	F	S	M	G	V	T	R	G	K	W	G	T	L
Query Conservation																																																									.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.														.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	D	F	S	D	Q	H	A	A	W	Q	A	F	L	D	R	G	V	L	I	R	D	V	G	I	A	G	H	L	R	T	T	I	G	.	.	.	V	P	E	E	N	D	A	F
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S											T	T				B			S		T	T								.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.
Template SS confidence
																																				312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.				.	.	.	350	.	.	.	.
		595	.	.	.	.	600	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	T	L	C	S	F	K	R	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	A	A	A	E	I	I	K	L
Template Known Secondary structure										T	T
Template Predicted Secondary structure
Template SS confidence
		355	.	.	.	.	360	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions