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Job DescriptionP28629
Confidence99.77%DateWed Jan 25 15:20:47 GMT 2012
Rank93Aligned Residues334
% Identity15%Templatec3b46B_
PDB info PDB header:transferaseChain: B: PDB Molecule:aminotransferase bna3; PDBTitle: crystal structure of bna3p, a putative kynurenine2 aminotransferase from saccharomyces cerevisiae
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   201........210......... 220.........230.........240.........250.........260.........270...
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Query Sequence  LDHTGAFGESEKYAARVFG. . . . . . . ADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMV
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Template Sequence  YSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVP
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   88.90.........100.........110.........120.........130.........140.........150.........160.......
 
   274.....280......... 290.........300.........310.........320.... .....330.........340.......
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Query Sequence  PSRNRYGIIGPIYPQE. . MQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYD. . . . GVCYNAKEAQDLLEKTSDRLHFD
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Template Sequence  INPPKELDQRNTRGEEWTIDFEQFEKAITSKT. . . . . . . . . . KAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISD
Template Known Secondary structure 

TTTTTS
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   168.170.........180.........190......... 200.........210.........220.........230.......
 
   348.350.........360.........370.........380.........390.........400.........410.........420.......
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Query Sequence  EAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYMMHATTSPLYAI
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Template Sequence  EVY. EHLYFTDSFTRIAT. . . . LSPEIGQLTLTVGSAGSFAATGWRIGWVLSLNA. . . ELLSYAAKAHTRICFASPSPLQ
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   238.240 .........250.... .....260.........270.........280....... ..290.........300.........
 
   428.430.........440.........450.........460.........470.........480.........490.........500.......
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Query Sequence  CASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQ
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Template Sequence  EACANSINDALKIGYFEKMRQEYINKFKIFTSIFDELGLPYTAPEG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   311........320.........330.........340.........350......
 
   508.510.........520.........530.........540.........550.........560.........570........
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Query Sequence  DCWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRTTDFQI. . . . . . . . .
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Template Sequence  . . . . . . . . . . . . . . . . . . . TYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAEN
Template Known Secondary structure  ...................SS
TTS


TT



GGGTSS


B
GGGGS
GGGGGGGTT
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   357..360.........370.........380.........390.........400.........410.......
 
   579580.........590.........600.....
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Query Sequence  MFLFSMGVTRGKWGTLVNTLCSFKRHY
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Template Sequence  LLRFAVCKDDAYLENAVERLKLLKDYL
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GGGGGG
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   418.420.........430.........440....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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