Job Description P28629 Confidence 97.61% Date Wed Jan 25 15:20:47 GMT 2012 Rank 304 Aligned Residues 111 % Identity 7% Template c3b2nA_ PDB info PDB header:transcription Chain: A: PDB Molecule:uncharacterized protein q99uf4; PDBTitle: crystal structure of dna-binding response regulator, luxr family, from2 staphylococcus aureus Resolution 2.04 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.					.
Query SS confidence																																	.					.
Query Sequence		K	V	L	I	V	E	S	E	F	L	H	Q	D	T	W	V	G	N	A	V	E	R	L	A	D	A	L	S	Q	Q	N	.	V	T	V	I	.	K	S	T	S	F	D	D	G	F	A	I	L	S	S	N	E	A	I	D	C	L	M	F	S	Y	Q	M	E	H	P	D	E	H	Q	N	V	R	Q	L	I	G	K	L
Query Conservation																																	.					.
Alig confidence														.	.	.	.	.	.	.	.												.					.																.														.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.																																	.														.	.	.	.
Template Sequence		S	L	I	I	A	E	D	Q	N	M	L	R	.	.	.	.	.	.	.	.	Q	A	M	V	Q	L	I	K	L	H	G	D	F	E	I	L	A	D	T	D	N	G	L	D	A	M	K	L	I	E	E	Y	.	N	P	N	V	V	I	L	D	I	E	M	P	G	.	.	.	.	M	T	G	L	E	V	L	A	E	I
Template Known Secondary structure								S						.	.	.	.	.	.	.	.											S	S								S													.			S						S	S		S	S	.	.	.	.	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.																																	.														.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.									.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.					.	.	.	.	.	.	.	.	70	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	E	R	Q	Q	N	V	P	V	F	L	L	G	D	R	E	K	A	L	A	A	M	D	R	D	L	L	E	L	V	D	E	F	A	W	I	L	E	D	T	A	D	F	I	A	G	R
Query Conservation
Alig confidence																				.
Template Conservation																				.
Template Sequence		R	K	K	H	L	N	I	K	V	I	I	V	T	T	F	K	R	P	.	G	Y	F	E	K	A	V	V	N	D	V	D	A	Y	V	L	K	E	R	S	I	E	E	L	V	E	T	I
Template Known Secondary structure				T	T		S								S					.									T	T		S					T	T	S
Template Predicted Secondary structure																				.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions