Job Description P28629 Confidence 92.80% Date Wed Jan 25 15:20:47 GMT 2012 Rank 351 Aligned Residues 119 % Identity 16% Template c2yxbA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:coenzyme b12-dependent mutase; PDBTitle: crystal structure of the methylmalonyl-coa mutase alpha-subunit from2 aeropyrum pernix Resolution 1.80 Å

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		2	.	.	.	.					.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.				.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure							.	.	.	.																															.	.	.
Query SS confidence							.	.	.	.																															.	.	.
Query Sequence		K	V	L	I	V	.	.	.	.	E	S	E	F	L	H	Q	D	T	W	V	G	N	A	V	E	R	L	A	D	A	L	S	Q	Q	N	V	T	V	I	.	.	.	K	S	T	S	F	D	D	G	F	A	I	L	S	S	N	E	A	I	D	C	L	M	F	S	Y	Q	M	E	H	P	D	E	H	Q	N	V	R	Q
Query Conservation							.	.	.	.																															.	.	.
Alig confidence							.	.	.	.								.	.	.	.	.	.	.	.																.	.	.																.														.	.
Template Conservation																		.	.	.	.	.	.	.	.																																		.														.	.
Template Sequence		K	V	L	V	A	K	X	G	L	D	G	H	D	R	G	A	.	.	.	.	.	.	.	.	K	V	V	A	R	A	L	R	D	A	G	F	E	V	V	Y	T	G	L	R	Q	T	P	E	Q	V	A	X	A	A	V	Q	E	.	D	V	D	V	I	G	V	S	I	L	N	G	A	.	.	H	L	H	L	X	K	R
Template Known Secondary structure									S	S	S	S						.	.	.	.	.	.	.	.										T	T								S	B													T	.	T		S							S	S	S		.	.
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.																																		.														.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.									.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.			.	.	.	.	.	.	90
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	G	K	L	H	E	R	Q	Q	N	V	P	V	F	L	L	G	D	R	E	K	A	L	A	A	M	D	R	D	L	L	E	L	V	D	E	F	A	W	I	L	E	D	T	A	D	F	I	A	G	R	A	V	A	A	M	T	R
Query Conservation
Alig confidence																									.																								.
Template Conservation																									.																								.
Template Sequence		L	X	A	K	L	R	E	L	G	A	D	D	I	P	V	V	L	G	G	T	I	P	I	.	P	D	L	E	P	L	R	S	L	G	I	R	E	I	F	L	P	G	T	S	L	G	E	.	I	I	E	K	V	R	K	L	A	E	E
Template Known Secondary structure									T	T		T	T	S											.									T	T							T	T						.
Template Predicted Secondary structure																									.																								.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions