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Job DescriptionP28629
Confidence99.58%DateWed Jan 25 15:20:47 GMT 2012
Rank190Aligned Residues312
% Identity15%Templatec2x5dD_
PDB info PDB header:transferaseChain: D: PDB Molecule:probable aminotransferase; PDBTitle: crystal structure of a probable aminotransferase from2 pseudomonas aeruginosa
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   195....200.........210......... 220.........230.........240.........250.........260......
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Query Sequence  TSLGSLLDHTGAFGESEKYAARVFG. . . . . . . . ADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTG
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Template Sequence  EDTHGYSTSRGI. PRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAG
Template Known Secondary structure  TT

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TT

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TTTSSS

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   65....70...... ...80.........90.........100.........110.........120.........130.........140...
 
   267..270.........280.........290.........300.........310.........320....... ..330.........340..
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Query Sequence  AKPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVC. . . . YNAKEAQDLLEKTSD
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Template Sequence  AQVRSVPLV. . . . . . . . . . . PGIDFFNELERAIRESI. . . . . . . PKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDV
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S...........TTS
TSS.......S

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   144.....150.. .......160......... 170.........180.........190.........200.....
 
   343......350.........360.........370.........380......... 390.........400.........410.........420.
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Query Sequence  RLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLN. ALSQASYIHVREGRGAINFSRFNQAYMMHATT
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Template Sequence  MVVHDLAYADIVYDGWKAPSIMQVPGAKD. . . . . IAVEFFTLSKSYNMAGWRIGFMVGNPEL. . . . VSALARIKSYHDYG
Template Known Secondary structure 
TTTT
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GGGSTTGGG.....TSTTTTT

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   206...210.........220.........230.... .....240.........250.........260.. .......270......
 
   422.......430.........440.........450.........460.........470.........480.........490.........500.
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Query Sequence  SPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTK
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Template Sequence  TFTPLQVAAIAAL. . . . . . EGDQQCVRDIARQYQQRRDVLVKGLREA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   277..280......... 290.........300.........310.......
 
   502.......510.........520.........530.........540.........550.........560.........570........
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Query Sequence  LLTTVQDCWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRTTDFQI. . .
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Template Sequence  . . . . . . . . . . . . . . . . . . GWMVENPKASMYVWAKIPEPYAHLG. . . . . . . . . . SLEFAKKLLQDAKVSVSPGIGFGDYGD
Template Known Secondary structure  ..................T





SBSS

TT
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GGGG
GGGT
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   318.320.........330.........340.. .......350.........360.........
 
   579580.........590.........600.
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Query Sequence  . MFLFSMGVTRGKWGTLVNTLCSF
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Template Sequence  DHVRFALIENRDRLRQAVRGIKAM
Template Known Secondary structure  T

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   370.........380.........390...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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