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Job DescriptionP28629
Confidence99.90%DateWed Jan 25 15:20:47 GMT 2012
Rank29Aligned Residues376
% Identity16%Templatec2jisA_
PDB info PDB header:lyaseChain: A: PDB Molecule:cysteine sulfinic acid decarboxylase; PDBTitle: human cysteine sulfinic acid decarboxylase (csad) in2 complex with plp.
Resolution1.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   142.......150........ .160.........170.........180.........190.........200.........210.........
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Query Sequence  LFSALMKYSDIHEYSWA. . APGHQGGVGFTKTPAGRFYHDYYGENLFRTDMGIERTSLGSLLDHTGAFGESEKYAARVFG
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Template Sequence  ILERCRAVIRYSVKTGHPRFFNQLFSGLDPHALAGRIITESLNTSQYTYEIA. . . . . . . . . PVFVLMEEEVLRKLRALVG
Template Known Secondary structure  S

TTSTTSSS







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TTT
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   70.........80.........90.........100.........110.........120. ........130.........140
 
   220... ......230.........240... ......250.........260.........270.... .....280...
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Query Sequence  ADRS. WSVVVGTSGSNRTIMQACMT. . . . . . . . . . . . . . DNDVVVVDRNCHKSIEQGLMLTGAKPVYMVP. SRNRYGIIG
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Template Sequence  WSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAAFLGLGTDSVRVVKADERGKM.
Template Known Secondary structure 
SS
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TT
GGGS

TTS
TTTS
GGG
B
TTS
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   141........150.........160.........170.........180.........190.........200.........210.........
 
   284.....290.........300.........310.........320.. .......330.........340.........350.........360..
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Query Sequence  PIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCT. YDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIYAD
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Template Sequence  . . . . . . . VPEDLERQIGMAE. . . . AEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRH
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BS
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TTGGGGGG
TTTGG
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   220.........230.. .......240.........250.........260.........270.........280........
 
   363......370.........380.........390.........400.........410.........420.........430 ....
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Query Sequence  HYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICAS. . . . . . . . NDVA
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Template Sequence  LLDGIQRAD. . . . . . . SVAWNPHKLLAAGLQCSALLLQDTS. . NLLKRCHGSKFYDVALDTGDKVVQCGRRVDCLKLWLM
Template Known Secondary structure  GGTTGGG
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   289290....... ..300.........310.........320.. .......330.........340.........350.........
 
   435....440.........450.........460.........470.........480.........490.........500.........510....
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Query Sequence  VSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHP
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Template Sequence  WKAQGDQGLERRIDQAFVLARYLVEEMKKREGFELVMEP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TSTTSS

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   369370.........380.........390.........400.......
 
   515....520.........530.........540.........550. ........560.........570........ .580..
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Query Sequence  GESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEE. . . . . . . TGVPAALVTAWLGRHGIVPTRTTDFQI. . . . . MFLF
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Template Sequence  . . . . . . . . . . . . . . . . . EFVNVCFWFVPPSLRGKQESPDYHERLSKVAPVLKERMVKEGSMMIGYQPHGTRGNFFRVVVA
Template Known Secondary structure  .................SSS

GGGTT
TTSTTTTS
TT

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   408.410.........420.........430.........440.........450.........460.........470
 
   583......590.........600.....
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Query Sequence  SMGVTRGKWGTLVNTLCSFKRHY
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Template Sequence  NSALTCADMDFLLNELERLGQDL
Template Known Secondary structure 
TT

TT
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   471........480.........490...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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