Job Description P28629 Confidence 99.42% Date Wed Jan 25 15:20:47 GMT 2012 Rank 220 Aligned Residues 276 % Identity 15% Template c2cy8A_ PDB info PDB header:transferase Chain: A: PDB Molecule:d-phenylglycine aminotransferase; PDBTitle: crystal structure of d-phenylglycine aminotransferase (d-phgat) from2 pseudomonas strutzeri st-201 Resolution 2.30 Å

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		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		S	E	K	Y	A	A	R	V	F	G	A	D	R	S	W	S	V	V	V	G	T	S	G	S	N	R	T	I	M	Q	A	C	M	T	D	N	D	.	V	V	V	V	D	R	N	C	H	K	S	I	E	Q	G	L	M	L	T	G	A	K	P	V	Y	M	V	P	S	R	N	R	Y	G	I	I	G	P	I	Y	P	Q
Query Conservation																																							.
Alig confidence																																							.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	E	R	I	V	A	A	F	P	S	I	R	K	L	R	F	T	G	S	G	T	E	T	T	L	L	A	L	R	V	A	R	A	F	T	G	R	R	M	I	L	R	F	E	G	T	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	T	L	L	I	R
Template Known Secondary structure										T	T		S						S																													G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150																											.	.	.	.	.	.
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.			.	.	.	.	.	.					330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure																																					.	.							.	.	.	.
Query SS confidence																																					.	.							.	.	.	.
Query Sequence		E	M	Q	P	E	T	L	Q	K	K	I	S	E	S	P	L	T	K	D	K	A	G	Q	K	P	S	Y	C	V	V	T	N	C	T	Y	.	.	D	G	V	C	Y	N	.	.	.	.	A	K	E	A	Q	D	L	L	E	K	T	S	D	R	L	H	F	D	E	A	W	Y	G	Y	A	R	F	N	P	I	Y	A	D
Query Conservation																																					.	.							.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.													.	.							.	.	.	.																								.								.
Template Conservation																	.	.	.	.	.	.	.	.																																																.								.
Template Sequence		P	D	D	I	E	G	M	R	E	V	F	A	N	H	G	.	.	.	.	.	.	.	.	S	D	I	A	A	F	I	A	E	P	V	G	S	H	F	G	V	T	P	V	S	D	S	F	L	R	E	G	A	E	L	A	R	Q	Y	G	A	L	F	I	L	D	E	V	I	S	G	.	F	R	V	G	N	H	G	.	M
Template Known Secondary structure		T	T													G	.	.	.	.	.	.	.	.	G	G								S	S						T																		T	T								T	T	T	T	.	T	T	T		T	T		.
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.																																																.								.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.									200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.		.
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Y	A	M	R	G	E	P	G	D	H	N	G	P	T	V	F	A	T	H	S	T	H	K	L	L	N	A	L	S	Q	A	S	Y	I	H	V	R	E	G	R	G	A	I	N	F	S	R	F	N	Q	A	Y	M	M	H	A	T	T	S	P	L	Y	A	I	C	A	S	N	D	V	A	V	S	M	M	D	G	N	S
Query Conservation
Alig confidence											.	.	.	.	.	.	.						.	.																			.	.			.	.	.	.	.	.	.																										.	.	.
Template Conservation											.	.	.	.	.	.	.						.	.																			.	.			.	.	.	.	.	.	.																										.	.	.
Template Sequence		Q	A	L	L	D	V	Q	P	D	.	.	.	.	.	.	.	L	T	C	L	A	.	.	K	A	S	A	G	G	L	P	G	G	I	L	G	G	R	E	D	V	.	.	M	G	.	.	.	.	.	.	.	V	L	S	R	G	S	F	T	G	N	P	I	T	A	A	A	A	I	A	A	I	D	T	I	L	.	.	.
Template Known Secondary structure						T				S	.	.	.	.	.	.	.						.	.	G	G	G	G	T	T	S	S											.	.		T	.	.	.	.	.	.	.	T	S	S	S																						.	.	.
Template Predicted Secondary structure											.	.	.	.	.	.	.						.	.																			.	.			.	.	.	.	.	.	.																										.	.	.
Template SS confidence
		255	.	.	.	.	260	.	.	.								.	.	.	.	.			.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.			.	.								.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		443	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	S	L	T	Q	E	V	I	D	E	A	V	D	F	R	Q	A	M	A	R	L	Y	K	E	F	T	A	D	G	S	W	F	F	K	P	W	N	K	E	V	V	T	D	P	Q	T	G	K	T	Y	D	F	A	D	A	P	T	K	L	L	T	T	V	Q	D	C	W	V	M	H	P	G	E	S	W	H	G	F	K
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	D	D	V	C	A	K	I	N	D	L	G	Q	F	A	R	E	A	M	N	H	L	F	A	R	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	T																							T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		523	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.																	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	I	P	D	N	W	S	M	L	D	P	I	K	V	S	I	L	A	P	G	M	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	E	L	E	E	T	G	V	P	A	A	L	V	T	A	W	L	G	R	H	G	I	V	P	T	R	T	T	D	F	Q	I	M	F	L	F	S	M	G	V
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																																																									.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	L	N	W	L	A	Y	G	R	F	S	G	F	H	L	M	P	G	L	P	P	N	T	T	D	T	G	S	I	T	R	A	E	V	A	R	P	D	V	K	M	I	A	A	M	R	M	A	L	I	L	E	G	V	D	I	G	.	.	.	.	G	R	G	S	V	F	L	S	A	Q	H
Template Known Secondary structure		.	.	.	.	.	.	.	.	.									T	T							T	S		T	T									T	T		S																		T	T				B	.	.	.	.	T	T	T						T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																																									.	.	.	.
Template SS confidence
											350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.					.	.	.	.	410	.	.	.	.	.	.
		587	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	G	K	W	G	T	L	V	N	T	L	C	S	F	K	R	H	Y	D	A	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	R	E	H	V	E	H	L	V	T	T	F	D	R	V	L	D	R	L	A	D	E
Template Known Secondary structure																							T
Template Predicted Secondary structure
Template SS confidence
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions