Job Description P28629 Confidence 98.04% Date Wed Jan 25 15:20:47 GMT 2012 Rank 260 Aligned Residues 121 % Identity 17% Template c1w25B_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:stalked-cell differentiation controlling protein; PDBTitle: response regulator pled in complex with c-digmp Resolution 2.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	L	I	V	E	S	E	F	L	H	Q	D	T	W	V	G	N	A	V	E	R	L	A	D	A	L	S	Q	Q	N	V	T	V	I	K	S	T	S	F	D	D	G	F	A	I	L	S	S	N	E	A	I	D	C	L	M	F	S	Y	Q	M	E	H	P	D	E	H	Q	N	V	R	Q	L	I	G	K	L	H	E
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.																																.												.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.																																.												.	.	.	.
Template Sequence		R	I	L	V	V	D	D	I	E	A	N	V	.	.	.	.	.	.	.	.	R	L	L	E	A	K	L	T	A	E	Y	Y	E	V	S	T	A	M	D	G	P	T	A	L	A	M	A	A	R	D	L	.	P	D	I	I	L	L	D	V	M	M	P	.	.	.	.	G	M	D	G	F	T	V	C	R	K	L	K	D
Template Known Secondary structure								S	S	T	T			.	.	.	.	.	.	.	.										T	T							S	S													.		S						S			S	.	.	.	.	S	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.																																.												.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.									.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.					.	.	60	.	.	.	.	.	.	.	.	.	70
				82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	R	Q	Q	N	V	P	V	F	L	L	G	D	R	E	K	A	L	A	A	M	D	R	D	L	L	E	L	V	D	E	F	A	W	I	L	E	D	T	A	D	F	I	A	G	R	A	V	A	A	M	T	R	Y	R	Q
Query Conservation		.	.
Alig confidence		.	.																	.
Template Conservation																				.
Template Sequence		D	P	T	T	R	H	I	P	V	V	L	I	T	A	L	D	G	R	.	G	D	R	I	Q	G	L	E	S	G	A	S	D	F	L	T	K	P	I	D	D	V	M	L	F	A	R	V	R	S	L	T	R	F	K	L	V	I
Template Known Secondary structure		S	T	T	T	T	T	S								S	S			.										T							S	S
Template Predicted Secondary structure																				.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions