 |
| Job Description | P0A703 | | Confidence | 41.79% | Date | Thu Jan 5 11:04:20 GMT 2012 |
| Rank | 147 | Aligned Residues | 22 |
| % Identity | 32% | Template | c3k7aM_ |
| PDB info |
PDB header:transcription | Chain: M: PDB Molecule:transcription initiation factor iib; |
PDBTitle: crystal structure of an rna polymerase ii-tfiib complex
|
| Resolution | 3.80 Å |
|
|   |   |
72 | . | . | . | . | . | . | . | |
|
|
|
|
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . |
| Predicted Secondary structure |   |
 |  |
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
W | C | W | D | C | S | Q | V | . |
. |
. |
. |
. |
V | E | I | H | Q | H | D | A | Q | C | P | L | C | H |
| Query Conservation |   |
  |
|   |   |
|
|   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|
|   |
|
|   |   |   |   |   |
|
|   |
|   |   |   |
|   |   |
|
|   |   |
|
|
| Template Sequence |   |
T | C | P | E | C | K | V | Y | P | P | K | I | V | E | R | F | S | E | G | D | V | V | C | A | L | C | G |
| Template Known Secondary structure |   |
|
| S | T | T |
|
| S |
|
|
|
|
|
|
| S | S | S |
| S |
|
|
| S | S | S |
|
| Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|