Job Description P0A703 Confidence 23.85% Date Thu Jan 5 11:04:20 GMT 2012 Rank 218 Aligned Residues 38 % Identity 24% Template c2xzlA_ PDB info PDB header:hydrolase/rna Chain: A: PDB Molecule:atp-dependent helicase nam7; PDBTitle: upf1-rna complex Resolution 2.40 Å

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80																															.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	V	Y	K	P	A	Q	A	W	C	W	D	C	S	Q	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	H	Q	H	D	A	Q	C	P	L	C	H	G	E	R	L	R	V	D	T
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	D	S	A	K	C	V	I	K	C	N	S	C	K	K	W	F	C	N	T	K	N	G	T	S	S	S	H	I	V	N	H	L	V	L	S	H	H	N	V	V	S	L	H	P	D	S	D	L	G	D	T	V	L	E	C	Y	N	C	G	R	K	N	V	F	L	L	G
Template Known Secondary structure					T	T	T					T	T	T									S	S	S	S	S											T								T	T	S	S	S		S		B				S	S	S					T	T	T
Template Predicted Secondary structure
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions