Return to main results Retrieve Phyre Job Id

Job DescriptionP45544
Confidence75.07%DateThu Jan 5 12:03:03 GMT 2012
Rank294Aligned Residues58
% Identity12%Templated2j5pa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain FtsK C-terminal domain-like
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60.........70....
Predicted Secondary structure 

























Query SS confidence 



































































Query Sequence  YSHQLLYATVRQRLLDDIAQGVYQAGQQIPTENELCTQYNVSRITIRKAISDLVADGVLIRWQGKGTF
Query Conservation   
  


  
   
   
  
   

  



  

   



 


 

  
   


    
 

 
Alig confidence 
















.........


.





































Template Conservation     
 
   
   
   .........   .
 
 


   










 

  




  
   
Template Sequence  EELDPLFDQAVQFVTEK. . . . . . . . . RKA. SISGVQRQFRIGYNRAARIIEQMEAQGIVSEQGHNGNR
Template Known Secondary structure  TTS
TTT.........T.T

TSB



SSS
Template Predicted Secondary structure 




.........


.















Template SS confidence 



































































   1263......1270......... 1280.. .......1290.........1300.........1310.........1320
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions