Return to main results Retrieve Phyre Job Id

Job DescriptionP45544
Confidence47.36%DateThu Jan 5 12:03:03 GMT 2012
Rank407Aligned Residues32
% Identity34%Templated1hsta_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Linker histone H1/H5
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   41....... .50.........60.........70..
Predicted Secondary structure 


...





Query SS confidence 







. . .























Query Sequence  LCTQYNVS. . . RITIRKAISDLVADGVLIRWQGKG
Query Conservation 

   


...
 


 

  
   


    
 
Alig confidence 







...























Template Conservation 
   
         
  


  
  
 


 

 
Template Sequence  IKSHYKVGHNADLQIKLSIRRLLAAGVLKQTKGVG
Template Known Secondary structure  S


TTTTS

SS
Template Predicted Secondary structure 









Template SS confidence 


































   54.....60.........70.........80........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions