 |
Job Description | P45544 | Confidence | 37.61% | Date | Thu Jan 5 12:03:03 GMT 2012 |
Rank | 460 | Aligned Residues | 55 |
% Identity | 15% | Template | d1g2ha_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| Homeodomain-like
| FIS-like
|
Resolution | UNK |
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | S | A | T | D | R | Y | S | H | Q | L | L | Y | A | T | V | R | Q | R | L | L | D | D | I | A | Q | G | V | Y | Q | A | G | Q | Q | I | P | T | E | N | E | L | C | T | Q | Y | N | V | S | R | I | T | I | R | K | A | I | S | D | L |
Query Conservation |   |
|   |   |   |   |   |   |
|   |   |
|
|
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|   |   |
|
|
|
|   |   |
|
|   |   |   |
|
|
|
|   |
|
|
|   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|
| . | . | . | . |   |   |   |
|
|   |   |   |
|
|   |   |
|
|
|
|
|   |
|
|   |   |
|
|
|
|   |
Template Sequence |   |
V | I | S | L | D | E | F | E | N | K | T | L | D | E | I | I | G | F | Y | E | A | Q | V | L | K | L | F | Y | . |
. |
. |
. |
A | E | Y | P | S | T | R | K | L | A | Q | R | L | G | V | S | H | T | A | I | A | N | K | L | K | Q | Y |
Template Known Secondary structure |   |
S |
|
| T | T | S | T | T | S | S |
| S | S | S | S |
| S |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  | S |
| S |  |  |  |  |  |  |  | T | T | S |
| T |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | |
|
|
|
. | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|