 |
Job Description | P45544 | Confidence | 85.54% | Date | Thu Jan 5 12:03:03 GMT 2012 |
Rank | 232 | Aligned Residues | 51 |
% Identity | 12% | Template | c3mwmA_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:putative metal uptake regulation protein; |
PDBTitle: graded expression of zinc-responsive genes through two regulatory2 zinc-binding sites in zur
|
Resolution | 2.40 Å |
|
  |   |
21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | D | D | I | A | Q | G | V | Y | Q | A | G | Q | Q | I | P | T | E | N | E | L | C | T | Q | Y | . |
. |
. |
. |
. |
N | V | S | R | I | T | I | R | K | A | I | S | D | L | V | A | D | G | V | L | I | R | W | Q | G | K | G |
Query Conservation |   |
  |   |   |
|   |   |
|   |   |   |
|
|   |   |
|
|
|
|   |   |
|
|   |   |   | . | . | . | . | . |
|
|
|
|   |
|
|
|   |
|
|   |   |
|   |   |   |
|
|
|   |   |   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |   |
|   |   |   |   |   |
|   | . |
|
|   |
|
|   |   |   |
|   |   |   |   |   |   |
|   |   |
|
|
|
|
|   |
|   |   |
|   |   |   |
|
|
|   |   |   |   |   |   |   |
Template Sequence |   |
R | A | A | V | S | A | A | L | Q | E | V | E | E | F | R | . |
S | A | Q | E | L | H | D | M | L | K | H | K | G | D | A | V | G | L | T | T | V | Y | R | T | L | Q | S | L | A | D | A | G | E | V | D | V | L | R | T | A | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | T |
| S | S |
|  | . |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |  |  |  |  |
| T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | |
. | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|