Job Description P45544 Confidence 99.87% Date Thu Jan 5 12:03:03 GMT 2012 Rank 10 Aligned Residues 159 % Identity 19% Template c3f8lC_ PDB info PDB header:transcription Chain: C: PDB Molecule:hth-type transcriptional repressor phnf; PDBTitle: crystal structure of the effector domain of phnf from mycobacterium2 smegmatis Resolution 1.90 Å

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		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		N	A	L	L	T	V	S	G	F	T	D	F	G	V	S	Q	G	K	A	T	K	E	K	V	I	E	Q	E	R	V	S	.	A	A	P	F	C	E	K	L	N	I	P	G	N	S	E	V	F	H	L	C	R	V	M	Y	L	D	K	E	P	L	F	I	D	S	S	W	I	P	L	S	R	Y	P	D	F	D	E	I
Query Conservation																																	.
Alig confidence																																	.
Template Conservation
Template Sequence		R	Q	P	L	G	M	G	S	Y	T	E	A	A	K	A	Q	G	L	S	A	G	R	I	L	V	A	W	S	D	L	T	A	D	E	V	L	A	G	V	L	G	V	D	V	G	A	P	V	L	Q	L	E	R	V	L	T	T	D	G	V	R	V	G	L	E	T	T	K	L	P	A	Q	R	Y	P	G	L	R	E	T
Template Known Secondary structure							S	S									T	T																								T			T	T													T	T												G	G	G	S	T	T
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	V	E	G	S	S	T	Y	Q	L	F	Q	E	R	F	D	T	R	V	V	S	D	K	K	T	I	D	I	F	A	A	T	R	P	Q	A	K	W	L	K	C	E	L	G	E	P	L	F	R	I	S	K	I	A	F	D	Q	N	D	K	P	V	H	V	S	E	L	F	C	R	A	N	R	I	T	L	T	I	D	N
Query Conservation
Alig confidence															.
Template Conservation															.
Template Sequence		F	D	H	E	A	S	L	Y	A	E	I	R	S	.	R	G	I	A	F	T	R	T	V	D	T	I	D	T	A	L	P	D	A	R	E	A	A	L	L	G	A	D	A	R	T	P	M	F	L	L	N	R	V	S	Y	D	Q	D	D	V	A	I	E	Q	R	R	S	L	Y	R	G	D	R	M	T	F	T	A	V	M
Template Known Secondary structure				T	T	S									.	T	T																								T			T	T	S												T	T	S												T	T	T
Template Predicted Secondary structure															.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		241
Predicted Secondary structure
Query SS confidence
Query Sequence		K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		236

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions