Job Description P45544 Confidence 100.00% Date Thu Jan 5 12:03:03 GMT 2012 Rank 5 Aligned Residues 233 % Identity 15% Template c3eetA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:putative gntr-family transcriptional regulator; PDBTitle: crystal structure of putative gntr-family transcriptional2 regulator Resolution 1.97 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.						.	80	.	.	.
Predicted Secondary structure																																																																								.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.
Query Sequence		H	Q	L	L	Y	A	T	V	R	Q	R	L	L	D	D	I	A	Q	G	V	Y	Q	A	G	Q	Q	I	P	T	E	N	E	L	C	T	Q	Y	N	V	S	R	I	T	I	R	K	A	I	S	D	L	V	A	D	G	V	L	I	R	W	Q	G	K	G	T	F	V	Q	S	Q	.	.	.	.	.	K	V	E	N	A
Query Conservation																																																																								.	.	.	.	.
Alig confidence																																																																								.	.	.	.	.
Template Conservation
Template Sequence		E	Q	P	A	Y	L	R	V	A	G	D	L	R	K	K	I	V	D	G	S	L	P	P	H	T	R	L	P	S	Q	A	R	I	R	E	E	Y	G	V	S	D	T	V	A	L	E	A	R	K	V	L	X	A	E	G	L	V	E	G	R	S	G	T	Y	V	R	E	R	P	V	P	R	R	V	A	R	S	G	Y	R
Template Known Secondary structure																				T	S	S		T	T	S	B												T																T	T	S																						S	S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	T	V	S	G	F	T	D	F	G	V	S	Q	G	K	A	T	K	E	K	V	I	E	Q	E	R	V	S	A	A	P	F	C	E	K	L	N	I	P	G	N	S	E	V	F	H	L	C	R	V	M	Y	L	D	K	E	P	L	F	I	D	S	S	W	I	P	L	S	R	Y	P	D	F	D	E	I	Y	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	S	G	A	T	P	F	R	Q	E	Q	A	D	G	A	V	R	G	T	W	E	S	H	S	E	Q	A	E	A	S	G	A	I	A	E	R	L	D	I	R	P	G	E	R	V	X	C	T	K	Y	V	F	R	D	A	G	E	V	X	X	L	S	T	S	W	E	P	L	A	V	T	G	R	T	P	V	X	L	P	E
Template Known Secondary structure															T	T																							T	S		T	T													T	T																T	T	S	T	T	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		164	.	.					.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.
Query SS confidence					.	.	.	.
Query Sequence		G	S	S	.	.	.	.	T	Y	Q	L	F	Q	E	R	F	D	T	R	V	V	S	D	K	K	T	I	D	I	F	A	A	T	R	P	Q	A	K	W	L	K	C	E	L	G	E	P	L	F	R	I	S	K	I	A	F	D	Q	N	D	K	P	V	H	V	S	E	L	F	C	R	A	N	R	I	T	L	T	I	D
Query Conservation					.	.	.	.
Alig confidence					.	.	.	.																																															.
Template Conservation																																																							.
Template Sequence		E	G	P	V	G	G	X	G	V	V	E	R	X	A	A	I	D	V	I	V	D	N	V	T	E	E	V	G	A	R	P	G	L	A	E	E	L	L	T	L	G	G	V	P	G	H	V	V	L	V	I	Q	R	.	T	Y	F	A	S	G	R	P	V	E	T	A	D	V	V	V	P	A	D	R	Y	R	V	A	Y	H
Template Known Secondary structure		S	S	T	T	T	T	S								T	T	T																								T			T	T									.					T	T												T	T	T
Template Predicted Secondary structure																																																							.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	K	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	P	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		247	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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