Job Description P45544 Confidence 100.00% Date Thu Jan 5 12:03:03 GMT 2012 Rank 3 Aligned Residues 218 % Identity 22% Template c3edpB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:lin2111 protein; PDBTitle: the crystal structure of the protein lin2111 (functionally unknown)2 from listeria innocua clip11262 Resolution 2.09 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	L	Y	A	T	V	R	Q	R	L	L	D	D	I	A	Q	G	V	Y	Q	A	G	Q	Q	I	P	T	E	N	E	L	C	T	Q	Y	N	V	S	R	I	T	I	R	K	A	I	S	D	L	V	A	D	G	V	L	I	R	W	Q	G	K	G	T	F	V	Q	S	Q	K	V	E	N	A	L	L	T	V	S	G
Query Conservation
Alig confidence																									.	.																																																			.	.	.	.	.
Template Conservation																									.	.																																																			.	.	.	.	.
Template Sequence		K	P	L	F	E	V	I	A	S	K	I	K	D	S	I	N	R	D	E	Y	K	T	G	.	.	X	P	N	E	T	A	L	Q	E	I	Y	S	S	S	R	T	T	I	R	R	A	V	D	L	L	V	E	E	G	L	V	V	R	K	N	G	V	G	L	Y	V	Q	P	K	L	T	A	Q	N	I	.	.	.	.	.
Template Known Secondary structure																		T	T	S	S				.	.											T	T																T	T	S					T	T	T														.	.	.	.	.
Template Predicted Secondary structure																									.	.																																																			.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	D	F	G	V	S	Q	G	K	A	T	K	E	K	V	I	E	Q	E	R	V	S	A	A	P	F	C	E	K	L	N	I	P	G	N	S	E	V	F	H	L	C	R	V	M	Y	L	D	K	E	P	L	F	I	D	S	S	W	I	P	L	S	R	Y	P	D	F	D	E	I	Y	V	E	G	S	S	T	Y	Q
Query Conservation
Alig confidence		.	.	.																																																.
Template Conservation		.	.	.																																																.
Template Sequence		.	.	.	L	E	X	T	G	V	X	L	K	K	D	I	K	D	F	Y	I	R	K	A	G	K	F	Y	A	E	I	F	G	X	K	E	N	E	L	V	Y	S	I	K	F	V	Q	K	S	E	H	.	G	A	T	L	D	R	L	I	L	P	L	G	L	Y	P	D	L	Q	A	K	D	F	Q	I	I	N	I	I	E
Template Known Secondary structure		.	.	.																													T	S		T	T	S												T	T	.											G	G	G	S	T	T			G	G	G				S
Template Predicted Secondary structure		.	.	.																																																.
Template SS confidence
					80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	Q	E	R	F	D	T	R	V	V	S	D	K	K	T	I	D	I	F	A	A	T	R	P	Q	A	K	W	L	K	C	E	L	G	E	P	L	F	R	I	S	K	I	A	F	D	Q	N	D	K	P	V	H	V	S	E	L	F	C	R	A	N	R	I	T	L	T	I	D
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		L	V	.	N	S	G	K	Y	K	L	F	E	L	E	Q	E	L	Q	L	I	L	A	G	N	E	Q	I	K	N	X	H	L	N	E	N	D	P	V	F	K	L	S	S	V	F	Y	A	E	N	D	X	P	I	A	I	Q	Y	H	Y	E	D	A	E	S	T	K	Y	V	V	D
Template Known Secondary structure				.	T	T	S	S	S																										T	T													T	T	T															S	S
Template Predicted Secondary structure				.
Template SS confidence
		163	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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