Job Description P45544 Confidence 29.66% Date Thu Jan 5 12:03:03 GMT 2012 Rank 500 Aligned Residues 47 % Identity 11% Template c2k9mA_ PDB info PDB header:transcription Chain: A: PDB Molecule:rna polymerase sigma factor rpon; PDBTitle: structure of the core binding domain of sigma54 Resolution UNK

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	Y	A	T	V	R	Q	R	L	L	D	D	I	A	Q	G	V	Y	Q	A	G	Q	Q	I	P	T	E	N	E	L	C	T	Q	Y	N	V	S	R	I	T	I	R	K	A	I	S	D	L	V	A
Query Conservation
Alig confidence																								.	.	.	.
Template Conservation																								.	.	.	.
Template Sequence		G	K	E	Q	E	L	A	L	E	L	L	N	Y	L	N	E	K	G	F	L	S	K	.	.	.	.	S	V	E	E	I	S	D	V	L	R	C	S	V	E	E	L	E	K	V	R	Q	K	V	L	R
Template Known Secondary structure		S										T	T	S	B		T	T	S	S	B	S	S	.	.	.	.									T	T															T
Template Predicted Secondary structure																								.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.					.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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