Job Description P45544 Confidence 61.57% Date Thu Jan 5 12:03:03 GMT 2012 Rank 336 Aligned Residues 38 % Identity 16% Template c1u5tB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:defective in vacuolar protein sorting; vps36p; PDBTitle: structure of the escrt-ii endosomal trafficking complex Resolution 3.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		T	E	N	E	L	C	T	Q	Y	N	V	S	R	I	T	I	R	K	A	I	S	D	L	V	A	D	G	V	L	I	R	.	W	Q	G	K	G	T	F
Query Conservation																																	.
Alig confidence																																	.
Template Conservation
Template Sequence		I	L	S	S	N	N	S	K	S	N	W	T	L	G	I	L	M	E	V	L	Q	N	C	V	D	E	G	D	L	L	I	D	K	Q	L	S	G	I	Y
Template Known Secondary structure					T	S		T	T																			T	S							S	S
Template Predicted Secondary structure
Template SS confidence
		517	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions