Job Description P45544 Confidence 78.48% Date Thu Jan 5 12:03:03 GMT 2012 Rank 280 Aligned Residues 33 % Identity 30% Template c1l9uH_ PDB info PDB header:transcription Chain: H: PDB Molecule:sigma factor siga; PDBTitle: thermus aquaticus rna polymerase holoenzyme at 4 a2 resolution Resolution 4.00 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.					.	.	.	.	.	.	60	.	.
Predicted Secondary structure																											.	.	.	.
Query SS confidence																											.	.	.	.
Query Sequence		Y	Q	A	G	Q	Q	I	P	T	E	N	E	L	C	T	Q	Y	N	V	S	R	I	T	I	R	.	.	.	.	K	A	I	S	D	L	V	A	D
Query Conservation																											.	.	.	.
Alig confidence									.																		.	.	.	.
Template Conservation									.
Template Sequence		L	I	D	G	R	E	H	.	T	L	E	E	V	G	A	Y	F	G	V	T	R	E	R	I	R	Q	I	E	N	K	A	L	R	K	L	K	Y	H
Template Known Secondary structure		T	T	S	S				.							T	T	S		S
Template Predicted Secondary structure									.
Template SS confidence
		390	.	.	.	.	.	.		.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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