 |
| Job Description | A5A611 | | Confidence | 0.71% | Date | Thu Jan 5 10:55:16 GMT 2012 |
| Rank | 61 | Aligned Residues | 21 |
| % Identity | 29% | Template | c3h0gK_ |
| PDB info |
PDB header:transcription | Chain: K: PDB Molecule:dna-directed rna polymerase ii subunit rpb11; |
PDBTitle: rna polymerase ii from schizosaccharomyces pombe
|
| Resolution | 3.65 Å |
|
| | |
35 | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . |
| Predicted Secondary structure | |
 | | | | | | |
|
|
|
|  | | | |  | | | |
|
|
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
S | L | V | K | Q | I | L | I | E | D | E | I | I | V | C | A | T | Y | L | I | P |
| Query Conservation | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
|
|
| | |
| | | | | |
| |
|
|
|
| |
|
|
| Template Sequence | |
N | M | L | A | N | Q | L | L | S | D | E | R | V | L | F | A | G | Y | K | V | P |
| Template Known Secondary structure | |
| | | | | T | G | G | G | S | T | T |
| S |
| B |
|
| B |
| S |
| Template Predicted Secondary structure | |
| | | | | | | | |
|
|
| | | | | | | | |
|
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
43 | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
