 |
Job Description | A5A611 | Confidence | 0.69% | Date | Thu Jan 5 10:55:16 GMT 2012 |
Rank | 63 | Aligned Residues | 14 |
% Identity | 50% | Template | c2w2hD_ |
PDB info |
PDB header:rna-binding protein | Chain: D: PDB Molecule:protein tat; |
PDBTitle: structural basis of transcription activation by the cyclin2 t1-tat-tar rna complex from eiav
|
Resolution | 3.25 Å |
|
  |   |
28 | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . |
Predicted Secondary structure |   |
 |  |
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | L | N | N | S | E | R | S | L | V | K | Q | I | L |
Query Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Sequence |   |
Y | L | D | A | S | L | R | K | K | N | K | Q | R | L |
Template Known Secondary structure |   |
S | S |
| T | T |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
43 | . | . | . | . | . | . | 50 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|