|   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | |
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. | . | . | 40 | . | . | . | . | . | . | |
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. | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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|  |  |  |  |  |  |
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
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|  | . | . |  |  |  |  |  |
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|
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |  |
Query SS confidence |   |
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| . |
. |
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| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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Query Sequence |   |
T | S | S | P | L | R | V | A | I | I | G | A | G | Q | V | A | D | K | V | H | A | S | Y | Y | C | T | R | N | D | L | E | . |
. |
L | V | A | V | C | D | S | R | L | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Q | A | Q | A | L | A | E | K | Y | G | N | A | S | V | W | D | D | P | Q | A | M | L |
Query Conservation |   |
  |   |   |   |
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|   |
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|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   | . | . |
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|   |
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
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|
Alig confidence |   |
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| . | . |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
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Template Conservation |   |
|   |
|   |
|   |
|   |
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|   |
|   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
Template Sequence |   |
S | T | K | V | V | N | V | A | V | I | G | A | G | V | V | G | S | A | F | L | D | Q | L | L | A | M | K | S | T | I | T | Y | N | L | V | L | L | A | E | A | E | R | S | L | I | S | K | D | F | S | P | L | N | V | G | S | D | W | K | A | A | L | A | A | S | T | T | K | T | L | P | L | D | D | L | I | A | H | L | K |
Template Known Secondary structure |   |
|
| S |  |  |  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| S | S |  |  |  |  |  |  |  |  |
| S | S | B |  |  |  |
| S | S |
| S |
|
| S |
| T | T |
|  |  |  |  |  |  | T |
|
|
| B |
|
|
|  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |
Template SS confidence |   |
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  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
  |   |
69 | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | |
|
. | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
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|  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  | . | . |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
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|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
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| . |
. |
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Query Sequence |   |
L | A | V | K | P | D | V | V | S | V | C | S | P | N | R | F | H | Y | E | H | T | L | M | A | L | E | A | G | C | H | V | M | C | . |
. |
E | K | P | P | A | M | T | P | E | Q | A | R | E | M | C | D | T | A | R | K | L | G | K | V | L | A | Y | D | F | H | H | R | F | A | L | D | T | Q | Q | L | R | E | Q | V | T |
Query Conservation |   |
  |   |   |   |
|
|   |
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|
|   |
|   |   | . | . |
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |
|   |   |
|   |
Alig confidence |   |
|
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| . | . |
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|
Template Conservation |   |
  |   |   |   |   |
|
|
|
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|   |
|
|
|   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |
|
|
|
|   |   |
|   |
|
|
|   |   |
|   |   |
|   |
|
Template Sequence |   |
T | S | P | K | P | V | I | L | V | D | N | T | S | S | A | Y | I | A | G | F | Y | T | K | F | V | E | N | G | I | S | I | A | T | P | N | K | K | A | F | S | S | D | L | A | T | W | K | A | L | F | S | N | K | P | T | N | G | F | V | Y | H | E | A | T | V | G | A | G | L | A | A | V | T | A | A | G | V | L | G | D |
Template Known Secondary structure |   |
T |
| S | S |
|  |  |  |  |  |
| S |
|
|  |  |  |  | T | T |  |  |  |  |  |  | T | T |
|  |  |  |
|
|
|
| G | G | G | S | S |
|  |  |  |  |  |  |  | T |
|
|
| T | T |
|
|
|  |  |
| G | G | G | T | T | T | T |
|
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
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|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
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|
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
  |
  |   |
147 | . | . | 150 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
Query Sequence |   |
N | G | V | L | G | E |
Query Conservation |   |
  |
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|   |
Template Sequence |   |
V | I | K | I | A | Q |
Template Known Secondary structure |   |
 |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
  |   |
352 | . | . | . | . | . |
  |