Job Description P77503 Confidence 96.42% Date Thu Jan 5 12:30:02 GMT 2012 Rank 390 Aligned Residues 85 % Identity 20% Template c5mdhB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of ternary complex of porcine cytoplasmic malate2 dehydrogenase alpha-ketomalonate and tnad at 2.4 angstroms resolution Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30						.	.	.	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.	.	.	.	.	.									.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure												.															.	.	.	.	.														.	.																.	.	.	.	.	.	.	.
Query SS confidence												.															.	.	.	.	.														.	.																.	.	.	.	.	.	.	.
Query Sequence		S	S	P	L	R	V	A	I	I	G	.	A	G	Q	V	A	D	K	V	H	A	S	Y	Y	C	.	.	.	.	.	T	R	N	D	L	E	L	V	A	V	C	D	S	.	.	R	L	S	Q	A	Q	A	L	A	E	K	Y	G	N	A	.	.	.	.	.	.	.	.	S	V	W	D	D	P	Q	A	M	L	L	A
Query Conservation												.															.	.	.	.	.														.	.																.	.	.	.	.	.	.	.
Alig confidence												.															.	.	.	.	.									.					.	.																.	.	.	.	.	.	.	.												.
Template Conservation																																								.																																									.
Template Sequence		S	E	P	I	R	V	L	V	T	G	A	A	G	Q	I	A	Y	S	L	L	Y	S	I	G	N	G	S	V	F	G	K	D	Q	P	I	I	L	V	.	L	L	D	I	T	P	M	M	G	V	L	D	G	V	L	M	E	L	Q	D	C	A	L	P	L	L	K	D	V	I	A	T	D	K	E	E	I	A	F	K	.
Template Known Secondary structure											S	T	T	S	T											T	T	T	T	T		T	T							.					G	G	G														T			T	T								S						T	T	.
Template Predicted Secondary structure																																								.																																									.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		71	.	.	.	.	.	.	.	.						80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure											.	.	.	.	.
Query SS confidence											.	.	.	.	.
Query Sequence		V	K	P	D	V	V	S	V	C	.	.	.	.	.	S	P	N	R	F	H	Y	E	H	T	L	M	A	L	E
Query Conservation											.	.	.	.	.
Alig confidence		.									.	.	.	.	.
Template Conservation		.
Template Sequence		.	D	L	D	V	A	I	L	V	G	S	M	P	R	R	D	G	M	E	R	K	D	L	L	K	A	N	V	K
Template Known Secondary structure		.	T		S							S					S	S	S		S		T	T
Template Predicted Secondary structure		.
Template SS confidence
			79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions