Job Description P77503 Confidence 100.00% Date Thu Jan 5 12:30:02 GMT 2012 Rank 34 Aligned Residues 316 % Identity 22% Template c3v5nA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:oxidoreductase; PDBTitle: the crystal structure of oxidoreductase from sinorhizobium meliloti Resolution 2.80 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.						.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.																				.	.								.	.	.	.	.
Query SS confidence																																		.																				.	.								.	.	.	.	.
Query Sequence		S	P	L	R	V	A	I	I	G	A	G	Q	V	A	D	K	V	H	A	S	Y	Y	C	T	R	N	D	L	E	L	V	A	.	V	C	D	S	R	L	S	Q	A	Q	A	L	A	E	K	Y	G	N	A	.	.	S	V	W	D	D	P	Q	.	.	.	.	.	A	M	L	L	A	V	K	P	D	V	V	S	V	C
Query Conservation																																		.																				.	.								.	.	.	.	.
Alig confidence																																		.																				.	.								.	.	.	.	.
Template Conservation
Template Sequence		K	R	I	R	L	G	X	V	G	G	G	A	F	I	G	A	V	H	R	I	A	A	R	L	D	D	H	Y	E	L	V	A	G	A	L	S	S	T	P	E	K	A	E	A	S	G	R	E	L	G	L	D	P	S	R	V	Y	S	D	F	K	E	X	A	I	R	E	A	K	L	K	N	G	I	E	A	V	A	I	V
Template Known Secondary structure										S																T	S											S	S												T			G	G	G	B		S													T	T			S
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	N	R	F	H	Y	E	H	T	L	M	A	L	E	A	G	C	H	V	M	C	E	K	P	P	A	M	T	P	E	Q	A	R	E	M	C	D	T	A	R	K	L	G	K	V	L	A	Y	D	F	H	H	R	F	A	L	D	T	Q	Q	L	R	E	Q	V	T	N	G	V	L	G	E	I	Y	V	T	T	A	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	P	N	H	V	H	Y	A	A	A	K	E	F	L	K	R	G	I	H	V	I	C	D	K	P	L	T	S	T	L	A	D	A	K	K	L	K	K	A	A	D	E	S	D	A	L	F	V	L	T	H	N	Y	T	G	Y	P	X	V	R	Q	A	R	E	X	I	E	N	G	D	I	G	A	V	R	L	V	Q	X	E
Template Known Secondary structure		S		T	T	S										T	T	T							S	S	S		S	S															S	S							G	G	G	G	S												T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	R	R	C	G	V	P	G	W	G	V	F	T	N	K	E	L	Q	G	G	G	P	L	I	D	I	G	I	H	M	L	D	A	A	M	Y	V	L	G	F	P	A	V	K	S	V	N	A	H	S	F	Q	K	I	G	T	Q	K	S	C	G	Q	F	G	E	W	D	P	A	T	Y	S	V	E	D	S	L	F	G
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.																														.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.																														.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	.	.	.	.	.	.	.	.	.	.	.	P	Q	D	W	L	T	E	N	G	G	S	T	G	D	I	G	T	H	A	Y	N	L	G	C	F	V	S	G	L	.	E	L	E	E	L	A	A	D	L	D	S	F	V	G	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	L	D	D	N	A	H	V
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.				T	T	S									T															.													S	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.		S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.																														.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		175												.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220															.	.	.	.	.	.	.	.
		240	.	.	.					.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.				280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure						.	.	.	.																																					.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.																																					.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	I	E	F	.	.	.	.	H	N	G	G	I	L	W	L	E	T	S	F	A	L	N	I	R	E	Q	S	I	M	N	V	S	F	C	G	D	K	A	G	A	T	L	F	.	.	.	P	A	H	I	Y	T	D	N	N	G	E	L	M	T	L	M	Q	R	E	I	A	D	.	.	.	.	.	.	.	.	.	.	.
Query Conservation						.	.	.	.																																					.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.																						.															.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.
Template Sequence		L	X	R	F	R	E	K	D	G	T	R	A	K	G	X	L	W	C	S	Q	V	A	P	G	H	E	N	G	L	.	X	V	R	V	Y	G	T	K	G	G	L	E	W	T	Q	K	D	P	N	Y	L	W	Y	T	P	F	G	E	P	K	R	L	L	T	R	A	G	A	G	A	S	P	A	A	A	R	V	S	R	I
Template Known Secondary structure								B	T	T	B										S			T	T		S	S			.							S	S							T	T	S	T	T							T	T	S							T	T	S	T	T							T	T			S
Template Predicted Secondary structure																															.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
										302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.					320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.		.	.	.	.	350
Predicted Secondary structure		.	.	.	.	.	.	.	.																			.	.	.	.																											.
Query SS confidence		.	.	.	.	.	.	.	.																			.	.	.	.																											.
Query Sequence		.	.	.	.	.	.	.	.	D	N	R	H	L	R	S	M	E	A	F	I	N	H	V	Q	G	K	.	.	.	.	P	V	M	I	A	D	A	E	Q	G	Y	I	I	Q	Q	L	V	A	A	L	Y	Q	S	A	E	T	.	G	T	R	V	E
Query Conservation		.	.	.	.	.	.	.	.																			.	.	.	.																											.
Alig confidence		.	.	.	.	.	.	.	.																			.	.	.	.																											.
Template Conservation
Template Sequence		P	S	G	H	P	E	G	Y	L	E	G	F	A	N	I	Y	S	E	A	A	R	A	I	Y	A	K	R	A	D	P	S	V	I	Y	P	T	I	D	D	G	X	R	G	X	T	F	V	D	A	C	V	R	S	S	E	R	N	G	A	W	I	K
Template Known Secondary structure			T	T	S																					T	T				T	T																									T	T	S			B
Template Predicted Secondary structure
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions