Job Description P77503 Confidence 100.00% Date Thu Jan 5 12:30:02 GMT 2012 Rank 37 Aligned Residues 298 % Identity 18% Template c3uuwB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:putative oxidoreductase with nad(p)-binding rossmann-fold PDBTitle: 1.63 angstrom resolution crystal structure of dehydrogenase (mvim)2 from clostridium difficile. Resolution 1.63 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	L	R	V	A	I	I	G	A	G	Q	V	A	D	K	V	H	A	S	Y	Y	C	T	R	N	D	L	E	L	V	A	V	C	D	S	R	L	S	Q	A	Q	A	L	A	E	K	Y	G	N	A	S	V	W	D	D	P	Q	A	M	L	L	A	V	K	P	D	V	V	S	V	C	S	P	N	R	F	H	Y	E
Query Conservation
Alig confidence																																																					.										.	.
Template Conservation																																																					.										.	.
Template Sequence		K	N	I	K	M	G	M	I	G	L	G	S	I	A	Q	K	A	Y	L	P	I	L	T	K	S	E	R	F	E	F	V	G	A	F	T	P	N	K	V	K	R	E	K	I	C	S	D	Y	R	I	M	.	P	F	D	S	I	E	S	L	A	.	.	K	K	C	D	C	I	F	L	H	S	S	T	E	T	H	Y	E
Template Known Secondary structure												S							T					T	S		S	S	S								S													T			.	B		S	S						.	.	T	T		S
Template Predicted Secondary structure																																																					.										.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	T	L	M	A	L	E	A	G	C	H	V	M	C	E	K	P	P	A	M	T	P	E	Q	A	R	E	M	C	D	T	A	R	K	L	G	K	V	L	A	Y	D	F	H	H	R	F	A	L	D	T	Q	Q	L	R	E	Q	V	T	N	G	V	L	G	E	I	Y	V	T	T	A	R	A	L	R	R	C	G	V	P
Query Conservation
Alig confidence																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	I	K	I	L	L	N	L	G	V	H	V	Y	V	D	K	P	L	A	S	T	V	S	Q	G	E	E	L	I	E	L	S	T	K	K	N	L	N	L	M	V	G	F	N	R	R	F	C	P	M	Y	K	E	I	K	N	N	A	T	E	I	V	S	I	N	I	C	K	H	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									T	T							S	S	S	S	S	S															T								G	G	G	G													S										.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	W	G	V	F	T	N	K	E	L	Q	G	G	G	P	L	I	D	I	G	I	H	M	L	D	A	A	M	Y	V	L	G	F	P	A	V	K	S	V	N	A	H	S	F	Q	K	I	G	T	Q	K	S	C	G	Q	F	G	E	W	D	P	A	T	Y	S	V	E	D	S	L	F	G	T	I	E	F	H	N	G	G
Query Conservation
Alig confidence		.	.																															.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																															.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	G	L	N	S	L	R	N	V	R	F	D	S	T	L	I	D	D	Y	I	H	V	I	D	T	A	L	W	L	A	N	.	.	E	D	V	E	I	S	G	E	D	L	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	D	N	K	N	L	I	F	V	S	H	K	L	K	G	K	N	F	S
Template Known Secondary structure		.	.		B	S				S	S									T														.	.	S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T													S	S
Template Predicted Secondary structure		.	.																															.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.																.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.					.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure																																																									.	.	.	.
Query SS confidence																																																									.	.	.	.
Query Sequence		I	L	W	L	E	T	S	F	A	L	N	I	R	E	Q	S	I	M	N	V	S	F	C	G	D	K	A	G	A	T	L	F	P	A	H	I	Y	T	D	N	N	G	E	L	M	T	L	M	Q	R	E	I	A	D	D	.	.	.	.	N	R	H	L	R	S	M	E	A	F	I	N	H	V	Q	G	K	P	V	M	I
Query Conservation																																																									.	.	.	.
Alig confidence		.	.	.	.																																																				.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	I	N	T	S	M	H	R	D	S	G	T	K	L	E	Q	V	E	I	L	S	K	G	K	I	Q	R	V	K	N	L	N	V	L	E	I	E	E	G	G	N	L	T	L	K	Q	S	G	A	W	V	N	I	L	K	Q	K	G	F	E	D	I	S	N	H	F	I	D	C	I	E	N	N	I	K	P	A
Template Known Secondary structure		.	.	.	.							T	T	B	S	S										T	T							T	T	T							T	T									T	T								T														T	T				S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	A	E	Q	G	Y	I	I	Q	Q	L	V	A	A	L	Y	Q	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	N	G	E	E	C	I	K	A	Q	R	L	L	E	K	I	I	N	S
Template Known Secondary structure		S		G	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions