Job Description P77503 Confidence 96.77% Date Thu Jan 5 12:30:02 GMT 2012 Rank 335 Aligned Residues 123 % Identity 16% Template c3u62A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase from thermotoga maritima Resolution 1.45 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.				.	.	.	.	.	.
Predicted Secondary structure																																																																									.	.	.
Query SS confidence																																																																									.	.	.
Query Sequence		R	V	A	I	I	G	A	G	Q	V	A	D	K	V	H	A	S	Y	Y	C	T	R	N	D	L	E	L	V	A	V	C	D	S	R	L	S	Q	A	Q	A	L	A	E	K	Y	G	N	A	S	V	W	D	D	P	Q	A	M	L	L	A	V	K	P	D	V	V	S	V	C	S	P	.	.	.	N	R	F	H	Y	E
Query Conservation																																																																									.	.	.
Alig confidence																.								.																									.												.	.											.	.	.
Template Conservation																.								.																									.												.	.
Template Sequence		P	V	V	V	V	G	A	G	G	A	A	R	A	V	.	I	Y	A	L	L	Q	M	.	G	V	K	D	I	W	V	V	N	R	T	I	E	R	A	K	A	L	D	F	P	V	K	I	.	F	S	L	D	Q	L	D	E	V	V	K	.	.	K	A	K	S	L	F	N	T	T	S	V	G	M	K	G	E	E	L	P
Template Known Secondary structure		S							S							.							T	.	T									S							T			S	S				.			G	G	G							.	.	T		S						S	S	T	T	T	T	S				S
Template Predicted Secondary structure																.								.																									.												.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		H	T	L	M	A	L	E	A	G	C	H	V	M	C	E	K	P	P	A	M	T	P	E	Q	A	R	E	M	C	D	T	A	R	K	L	G	K	.	V	L	A	Y	D	F	H	H	R	F	A	L	D	T	Q	Q	L	R	E	Q
Query Conservation																																							.
Alig confidence										.							.	.						.	.	.													.
Template Conservation										.							.	.						.	.	.
Template Sequence		V	S	D	D	S	L	K	N	.	L	S	L	V	Y	D	.	.	V	I	Y	F	D	.	.	.	T	P	L	V	V	K	A	R	K	L	G	V	K	H	I	I	K	G	N	L	M	F	Y	Y	Q	A	M	E	N	L	K	I	W
Template Known Secondary structure								T	T	.		S					.	.		S	S	S		.	.	.											T		S					T															T
Template Predicted Secondary structure										.							.	.						.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.		.	.	.	.	.	.			.	200	.	.	.				.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions