 |
Job Description | P77503 | Confidence | 95.22% | Date | Thu Jan 5 12:30:02 GMT 2012 |
Rank | 471 | Aligned Residues | 84 |
% Identity | 19% | Template | c3sz8D_ |
PDB info |
PDB header:transferase | Chain: D: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase 2; |
PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from2 burkholderia pseudomallei
|
Resolution | 2.05 Å |
|
 |
  |   |
46 | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | |
|
|
|
. | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|  |  | . | . | . | . |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | Q | A | Q | A | L | A | E | K | Y | G | N | A | S | V | W | D | D | P | Q | . |
. |
. |
. |
A | M | L | L | A | V | K | P | D | V | V | S | V | C | S | P | N | R | F | H | Y | E | H | T | L | M | A | L | E | A | G | C | H | V | M | C | E | K | P | P | A | M | T | P | E | Q | A | R | E | M | C | D | T | A | R | K |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . |   |
|
|   |   |   |   |
|
|   |
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|
|   |
|   |   |
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|   |   |   |   |   |
|
|   |   |   |
|
|   |   |
|   |   |   |
|
|   |
|   |   |   | . |
|
|   |   |
|
|
|
|   |   |   |   |
|   |   |
|
|   |   |
|
|   |   |
|
|
|
|
|
|
|   |
|
|   |   |
|   |   |
|   |   |   |
|
|
|   |
|   |   |
Template Sequence |   |
K | I | F | A | E | V | K | A | R | F | G | V | P | V | I | T | D | V | H | E | A | E | Q | A | A | P | V | A | E | I | . |
A | D | V | L | Q | V | P | A | F | L | A | R | Q | T | D | L | V | V | A | I | A | K | A | G | K | P | V | N | V | K | K | P | Q | F | M | S | P | T | Q | L | K | H | V | V | S | K | C | G | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
| S | G | G | G |  |  |  |  |  |  |  | . |
| S |  |  |  |  |
| G | G | G | T | T |
|  |  |  |  |  |  |  |  |  | T |
| S |
|  |  |  |  |
|
| T | T | S |
| T | T | S |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | |
. | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . |
  |
  |   |
122 | . | . | . | |
. | . | . | . | 130 |
Predicted Secondary structure |   |
|
|
|  | . |  |  |  |  |  |
Query SS confidence |   |
|
|
|
| . |
|
|
|
|
|
Query Sequence |   |
L | G | K | V | . |
L | A | Y | D | F |
Query Conservation |   |
  |   |   |   | . |   |   |
|   |   |
Alig confidence |   |
|
|
|
| . |
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|   |
|
|   |
Template Sequence |   |
V | G | N | D | R | V | M | L | C | E |
Template Known Secondary structure |   |
T | T |
|
|
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
  |   |
156 | . | . | . | 160 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|