Job Description P77503 Confidence 100.00% Date Thu Jan 5 12:30:02 GMT 2012 Rank 9 Aligned Residues 324 % Identity 20% Template c3q2kB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:oxidoreductase; PDBTitle: crystal structure of the wlba dehydrogenase from bordetella pertussis2 in complex with nadh and udp-glcnaca Resolution 2.13 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	L	R	V	A	I	I	G	A	G	Q	V	A	D	K	V	H	A	S	Y	Y	C	T	R	N	D	L	E	L	V	A	V	C	D	S	R	L	S	Q	A	Q	A	L	A	E	K	Y	G	N	A	S	V	W	D	D	P	Q	A	M	L	L	A	V	K	P	D	V	V	S	V	C	S	P	N	R	F	H	Y	E
Query Conservation
Alig confidence																																																					.
Template Conservation																																																					.
Template Sequence		R	K	I	R	F	G	L	V	G	C	G	R	I	S	K	N	H	I	G	A	I	A	Q	H	G	D	R	A	E	L	V	E	I	C	D	T	N	P	E	A	L	Q	A	A	E	A	A	T	G	A	R	.	P	F	S	S	L	S	D	M	L	A	Q	G	N	A	D	A	L	V	L	A	T	P	S	G	L	H	P	W
Template Known Secondary structure												S	T	T									T	T		T	T	T									S	S														B	.			S	S											S						S		G	G	G
Template Predicted Secondary structure																																																					.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		H	T	L	M	A	L	E	A	G	C	H	V	M	C	E	K	P	P	A	M	T	P	E	Q	A	R	E	M	C	D	T	A	R	K	L	G	K	V	L	A	Y	D	F	H	H	R	F	A	L	D	T	Q	Q	L	R	E	Q	V	T	N	G	V	L	G	E	I	Y	V	T	T	A	R	A	L	R	R	C	G	V	.
Query Conservation																																																																																	.
Alig confidence																																																																																	.
Template Conservation
Template Sequence		Q	A	I	E	V	A	Q	A	G	R	H	V	V	S	E	K	P	M	A	T	R	W	E	D	G	K	R	M	V	K	A	C	D	E	A	G	V	R	L	F	V	V	K	Q	N	R	R	N	A	T	L	Q	L	V	K	K	A	I	E	Q	G	R	F	G	R	I	Y	M	V	T	V	N	V	F	W	T	R	P	Q	E
Template Known Secondary structure									T	T							S	S	S		S	S															T								G	G	G	G													T	T	T	T		S											B
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
			167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	P	G	W	G	V	F	T	N	K	E	L	Q	G	G	G	P	L	I	D	I	G	I	H	M	L	D	A	A	M	Y	V	L	G	F	P	A	V	K	S	V	N	A	H	S	F	Q	K	I	G	T	Q	K	S	C	G	Q	F	G	E	W	D	P	A	T	Y	S	V	E	D	S	L	F	G	T	I	E	F	H	N
Query Conservation		.
Alig confidence		.																																		.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	Y	D	A	A	R	W	R	G	K	W	E	W	D	G	G	A	F	M	N	Q	A	S	H	Y	V	D	L	L	D	W	L	V	G	.	.	P	V	E	S	V	Y	A	Y	T	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	R	R	I	E	A	E	D	T	G	V	A	A	L	R	W	R	H
Template Known Secondary structure				T	T	S	T	T	T	T		T	T	T	T								T													.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S	S	S	S	S		S									T	T
Template Predicted Secondary structure																																				.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.			.	.	.	.	.	.	.	.	210	.	.															.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	I	L	W	L	E	T	S	F	A	L	N	I	R	E	Q	S	I	M	N	V	S	F	C	G	D	K	A	G	A	T	L	F	P	A	H	I	Y	T	D	N	N	G	E	L	M	T	L	M	Q	R	E	I	A	D	D	N	R	H	L	R	S	M	E	A	F	I	N	H	V	Q	G	K	P	V	M	I	A	D
Query Conservation
Alig confidence														.																																								.	.
Template Conservation														.																																								.	.
Template Sequence		G	A	M	G	S	I	N	V	T	M	L	T	.	Y	P	Q	N	L	E	G	S	I	T	I	L	G	E	K	G	T	V	R	V	G	G	V	A	V	N	R	I	D	E	W	K	F	A	E	P	H	P	D	.	.	D	D	K	F	G	H	P	L	Y	Y	D	N	V	I	N	C	L	R	G	D	C	E	P	E	T	D
Template Known Secondary structure		S									S	B		.	S	S	S											S	S							T	T	T	T									S	S			G	G	.	.	G																		T	S	S			S	S	B
Template Predicted Secondary structure														.																																								.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.			.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	Q	G	Y	I	I	Q	Q	L	V	A	A	L	Y	Q	S	A	E	T	G	T	R	V	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	R	E	G	L	Q	S	L	A	L	L	T	A	I	Y	R	S	A	R	D	G	V	R	I	P	L
Template Known Secondary structure																							S				S
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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