Job Description P77503 Confidence 100.00% Date Thu Jan 5 12:30:02 GMT 2012 Rank 3 Aligned Residues 338 % Identity 18% Template c3oqbF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:oxidoreductase; PDBTitle: crystal structure of putative oxidoreductase from bradyrhizobium2 japonicum usda 110 Resolution 2.60 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.								.	.	.	.	30	.	.	.	.	.	.	.	.	.										40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																				.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Query Sequence		S	P	L	R	V	A	I	I	G	A	G	Q	V	A	D	K	V	H	.	.	.	.	.	.	.	A	S	Y	Y	C	T	R	N	D	L	E	L	V	A	.	.	.	.	.	.	.	.	.	V	C	D	S	R	L	S	Q	A	Q	A	L	A	E	K	Y	G	N	A	S	V	W	D	D	P	Q	A	M	L	L	A	V
Query Conservation																				.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	T	Q	R	L	G	L	I	X	N	G	V	T	G	R	X	G	L	N	Q	H	L	I	R	S	I	V	A	I	R	D	Q	G	G	V	R	L	K	N	G	D	R	I	X	P	D	P	I	L	V	G	R	S	A	E	K	V	E	A	L	A	K	R	F	N	I	A	R	W	T	T	D	L	D	A	A	L	A	D	K
Template Known Secondary structure												S	T	T	S						T	T	T	T	T	T								T	S				T	T	S												S													T						S									T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	D	V	V	S	V	C	S	P	N	R	F	H	Y	E	H	T	L	M	A	L	E	A	G	C	H	V	M	C	E	K	P	P	A	M	T	P	E	Q	A	R	E	M	C	D	T	A	R	K	L	G	K	V	L	A	Y	D	F	H	H	R	F	A	L	D	T	Q	Q	L	R	E	Q	V	T	N	G	V	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	D	T	X	F	F	D	A	A	T	T	Q	A	R	P	G	L	L	T	Q	A	I	N	A	G	K	H	V	Y	C	E	K	P	I	A	T	N	F	E	E	A	L	E	V	V	K	L	A	N	S	K	G	V	K	H	G	T	V	Q	D	K	L	F	L	P	G	L	K	K	I	A	F	L	R	D	S	G	F	F	G
Template Known Secondary structure		T								S		T	T	T										T	T	T							S		S		S	S															T								G	G	G	G	S												T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.						.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.
Query SS confidence																	.	.	.	.	.
Query Sequence		E	I	Y	V	T	T	A	R	A	L	R	R	C	G	V	.	.	.	.	.	P	G	W	G	V	F	T	N	K	E	L	Q	G	G	G	P	L	I	D	I	G	I	H	M	L	D	A	A	M	Y	V	L	G	F	P	A	V	K	S	V	N	A	H	S	F	Q	K	I	G	T	Q	K	S	C	G	Q	F	G	E	W
Query Conservation																	.	.	.	.	.
Alig confidence																	.	.	.	.	.																																		.	.																			.	.	.	.
Template Conservation																																																							.	.																			.	.	.	.
Template Sequence		R	I	L	S	V	R	G	E	F	G	Y	W	V	F	E	G	G	W	Q	E	A	Q	R	P	S	W	N	Y	R	D	E	D	G	G	G	I	I	L	D	X	V	C	H	W	R	Y	V	L	D	N	L	F	G	.	.	N	V	Q	S	V	V	C	I	G	N	T	D	I	P	E	R	F	D	.	.	.	.	E	Q	G
Template Known Secondary structure		S															S	S	S	S			S	S		G	G	G	G		G	G	G	T																			T		.	.														S					.	.	.	.	T	T	S
Template Predicted Secondary structure																																																							.	.																			.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.			.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.					.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	P	A	T	Y	S	V	E	D	S	L	F	G	T	I	E	F	H	N	G	G	I	L	W	L	E	T	S	F	A	L	N	I	R	E	Q	S	I	M	N	V	S	F	C	G	D	K	A	G	A	T	L	F	P	A	H	I	Y	T	D	N	N	G	E	L	M	T	L	M	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	K	Y	K	A	T	A	D	D	S	A	Y	A	T	F	Q	L	E	G	G	V	I	A	H	I	N	X	S	W	V	T	R	V	Y	R	D	D	L	V	T	F	Q	V	D	G	T	H	G	S	A	V	A	G	L	S	D	C	X	I	Q	A	R	Q	A	T	P	R	P	V	W	N	P	K	R	L	H	D	F	Y	G
Template Known Secondary structure								S											T	T	T									S	S					S	S	S	S								S	S							S	S							G	G	G														G	G	G
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
							296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	Q	R	E	I	A	D	D	N	R	H	L	R	S	M	E	A	F	I	N	H	V	Q	G	K	P	V	M	I	A	D	A	E	Q	G	Y	I	I	Q	Q	L	V	A	A	L	Y	Q	S	A	E	T	G	T	R	V	E	L
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.
Template Conservation
Template Sequence		D	W	Q	K	L	P	D	N	V	S	Y	D	N	G	F	K	E	Q	W	E	X	F	I	R	H	V	Y	E	D	A	P	Y	K	F	T	L	L	E	G	A	K	G	V	Q	L	A	E	C	A	L	K	S	W	K	E	R	R	W	I	D	V
Template Known Secondary structure		G								S																										S																					T	S
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions