Job Description P77503 Confidence 96.98% Date Thu Jan 5 12:30:02 GMT 2012 Rank 294 Aligned Residues 123 % Identity 15% Template c3o8qB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate 5-dehydrogenase i alpha; PDBTitle: 1.45 angstrom resolution crystal structure of shikimate 5-2 dehydrogenase (aroe) from vibrio cholerae Resolution 1.45 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.
Query SS confidence																																																.	.
Query Sequence		R	V	A	I	I	G	A	G	Q	V	A	D	K	V	H	A	S	Y	Y	C	T	R	N	D	L	E	L	V	A	V	C	D	S	R	L	S	Q	A	Q	A	L	A	E	K	Y	G	.	.	N	A	S	V	W	D	D	P	Q	A	M	L	L	A	V	K	P	D	V	V	S	V	C	S	P	N	R	F	H	Y	E	H
Query Conservation																																																.	.
Alig confidence																.								.																								.	.																	.	.	.
Template Conservation																.								.																																										.	.	.
Template Sequence		T	I	L	L	I	G	A	G	G	A	A	R	G	V	.	L	K	P	L	L	D	Q	.	Q	P	A	S	I	T	V	T	N	R	T	F	A	K	A	E	Q	L	A	E	L	V	A	A	Y	G	E	V	K	A	Q	A	F	E	Q	L	K	Q	S	Y	D	.	.	.	V	I	I	N	S	T	S	G	E	L	P	A	I
Template Known Secondary structure									S							.						T	T	.			S							S	S											T	G	G	G	S							G	G	G			S			S	.	.	.
Template Predicted Secondary structure																.								.																																										.	.	.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.				.	.	.	190	.	.	.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure														.	.																									.
Query SS confidence														.	.																									.
Query Sequence		T	L	M	A	L	E	A	G	C	H	V	M	.	.	C	E	K	P	P	A	M	T	P	E	Q	A	R	E	M	C	D	T	A	R	K	L	G	K	.	V	L	A	Y	D	F	H	H	R	F	A	L	D	T	Q	Q	L	R	E	Q
Query Conservation														.	.																									.
Alig confidence														.	.									.	.	.	.	.	.											.
Template Conservation																								.	.	.	.	.	.
Template Sequence		D	P	V	I	F	S	S	R	S	V	C	Y	D	M	M	Y	G	K	G	Y	T	V	.	.	.	.	.	.	F	N	Q	W	A	R	Q	H	G	C	A	Q	A	I	D	G	L	G	M	L	V	G	Q	A	A	E	S	F	M	L	W
Template Known Secondary structure			G	G	G			T	T						S				S	S				.	.	.	.	.	.								T	T		S					T
Template Predicted Secondary structure																								.	.	.	.	.	.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.							.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions