Phyre 2 alignment of P77503 with c3nt5B

Job Description P77503
Confidence 100.00% Date Thu Jan 5 12:30:02 GMT 2012

Rank 21 Aligned Residues 320

% Identity 24% Template c3nt5B_

PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:inositol 2-dehydrogenase/d-chiro-inositol 3-dehydrogenase; PDBTitle: crystal structure of myo-inositol dehydrogenase from bacillus subtilis2 with bound cofactor and product inosose

Resolution 2.90 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence	P	L	R	V	A	I	I	G	A	G	Q	V	A	D	K	V	H	A	S	Y	Y	C	T	R	N	D	L	E	L	V	A	V	C	D	S	R	L	S	Q	A	Q	A	L	A	E	K	Y	G	N	.	A	S	V	W	D	D	P	Q	A	M	L	L	A	V	K	P	D	V	V	S	V	C	S	P	N	R	F	H	Y	E
Query Conservation																																																		.
Alig confidence																																																		.
Template Conservation
Template Sequence	S	L	R	I	G	V	I	G	T	G	A	I	G	K	E	H	I	N	R	I	T	N	K	L	S	G	A	E	I	V	A	V	T	D	V	N	Q	E	A	A	Q	K	V	V	E	Q	Y	Q	L	N	A	T	V	Y	P	N	D	D	S	L	L	A	D	E	N	V	D	A	V	L	V	T	S	W	G	P	A	H	E	S
Template Known Secondary structure										S													T	S	S	S									S	S											T	T							S	S								S	S								S		G	G	G
Template Predicted Secondary structure
Template SS confidence
	2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.

	88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence	H	T	L	M	A	L	E	A	G	C	H	V	M	C	E	K	P	P	A	M	T	P	E	Q	A	R	E	M	C	D	T	A	R	K	L	G	K	V	L	A	.	Y	D	F	H	H	R	F	A	L	D	T	Q	Q	L	R	E	Q	V	T	N	G	V	L	G	E	I	Y	V	T	T	A	R	A	L	R	R	C	G	V
Query Conservation																																									.
Alig confidence																																									.																																					.	.	.
Template Conservation																																																																														.	.	.
Template Sequence	S	V	L	K	A	I	K	A	Q	K	Y	V	F	C	E	K	P	L	A	T	T	A	E	G	C	M	R	I	V	E	E	E	I	K	V	G	K	R	L	V	Q	V	G	F	M	R	R	Y	D	S	G	Y	V	Q	L	K	E	A	L	D	N	H	V	I	G	E	P	L	M	I	H	C	A	H	R	N	P	.	.	.
Template Known Secondary structure								T	T							S		S		S	S														T	S	S								G	G	G	G	S												T	T	T	T		S											S	.	.	.
Template Predicted Secondary structure																																																																														.	.	.
Template SS confidence
	82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.

	167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	P	G	W	G	V	F	T	N	K	E	L	Q	G	G	G	P	L	I	D	I	G	I	H	M	L	D	A	A	M	Y	V	L	G	F	P	A	V	K	S	V	N	A	H	S	F	Q	K	I	G	T	Q	K	S	C	G	Q	F	G	E	W	D	P	A	T	Y	S	V	E	D	S	L	F	G	T	I	E	F	H	N	G
Query Conservation
Alig confidence	.	.	.	.	.																														.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation	.	.	.	.	.																														.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	.	.	.	.	.	T	V	G	D	N	Y	T	T	D	M	A	V	V	D	T	L	V	H	E	I	D	V	L	H	W	L	V	N	D	.	D	Y	E	S	V	Q	V	I	Y	P	K	K	S	K	N	A	L	P	.	.	.	.	.	.	.	.	.	.	.	.	H	L	K	D	P	Q	I	V	V	I	E	T	K	G	G
Template Known Secondary structure	.	.	.	.	.				T	T			T	T					T	T	T												T		.											S			T	T	S		T	.	.	.	.	.	.	.	.	.	.	.	.	T	S			S								S	S	S
Template Predicted Secondary structure	.	.	.	.	.																														.																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
						159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.													.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

	247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.				.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.		.
Predicted Secondary structure																																					.	.	.																																								.
Query SS confidence																																					.	.	.																																								.
Query Sequence	G	I	L	W	L	E	T	S	F	A	L	N	I	R	E	Q	S	I	M	N	V	S	F	C	G	D	K	A	G	A	T	L	F	P	A	H	.	.	.	I	Y	T	D	N	N	G	E	L	M	T	L	M	Q	R	E	I	A	D	D	N	R	H	L	R	S	M	E	A	F	I	N	H	V	Q	G	K	P	V	.	M
Query Conservation																																					.	.	.																																								.
Alig confidence													.	.																							.	.	.																																								.
Template Conservation													.	.
Template Sequence	I	V	I	N	A	E	I	Y	V	N	C	K	.	.	Y	G	Y	D	I	Q	C	E	I	V	G	E	D	G	I	I	K	L	P	E	P	S	S	I	S	L	R	K	E	G	R	F	S	T	D	I	L	M	D	W	Q	R	R	F	V	A	A	Y	D	V	E	I	Q	D	F	I	D	S	I	Q	K	K	G	E	V	S
Template Known Secondary structure									T	T		S	.	.	S											S	S																T	T																															T	T	S	S
Template Predicted Secondary structure													.	.
Template SS confidence
	221	.	.	.	.	.	.	.	.	230	.	.			.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.

	323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure
Query SS confidence
Query Sequence	I	A	D	A	E	Q	G	Y	I	I	Q	Q	L	V	A	A	L	Y	Q	S	A	E	T	G	T	R	V	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence	G	P	T	A	W	D	G	Y	I	A	A	V	T	T	D	A	C	V	K	A	Q	E	S	G	Q	K	E	K	V
Template Known Secondary structure	S	S																							S			B
Template Predicted Secondary structure
Template SS confidence
	299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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