Return to main results Retrieve Phyre Job Id

Job DescriptionP77503
Confidence99.74%DateThu Jan 5 12:30:02 GMT 2012
Rank60Aligned Residues145
% Identity18%Templatec3mtjA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:homoserine dehydrogenase; PDBTitle: the crystal structure of a homoserine dehydrogenase from thiobacillus2 denitrificans to 2.15a
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30... ......40.........50.........60.........70.......
Predicted Secondary structure 







.........
















Query SS confidence 


























. . . . . . . . .











































Query Sequence  SSPLRVAIIGAGQVADKVHASYYCTRN. . . . . . . . . DLELVAVCDSRLSQAQALAEKYGNASVWDDPQAMLLAVKPDVVS
Query Conservation     


 


 
          
    .........   



 
         
              

    

 
 
Alig confidence 

















.







.........






















...

















Template Conservation   
 






 
 

 

.   
      
  
 
  
 
  
  

  
 
       ...
  
  


 
  




Template Sequence  XKPIHVGLLGLGTVGGGT. LTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEALAGGLP. . . LTTNPFDVVDDPEIDIVV
Template Known Secondary structure 
S


.TSS

S
TT

...S
TT
TT

Template Predicted Secondary structure 




.









...









Template SS confidence 















































































   1........10........ .20.........30.........40.........50........ .60.........70......
 
   78.80.. .......90.........100.........110.........120....... ..130.........140.........150.....
Predicted Secondary structure 


.














.









Query SS confidence 




.












































.



























Query Sequence  VCSPN. RFHYEHTLMALEAGCHVMCEKPPAMTPEQAREMCDTARKLGKVLA. YDFHHRFALDTQQLREQVTNGVLGEIYV
Query Conservation 
 

 .  
      

  

 
  


      
   
   
        .
    
  
     
  
  
 

 
  
Alig confidence 




.





















.





















.



























Template Conservation 
 

    
   
  

 









.



  
 

  

   

 
  



 





  
   
 
  
  
 
Template Sequence  ELIGGLEPARELVXQAIANGKHVVTANK. HLVAKYGNEIFAAAQAKGVXVTFEAAVAGGIPIIKALREGLTANRIEWLAG
Template Known Secondary structure 


SSTTTT


.T


GGGSSTTS
TTTTTS
Template Predicted Secondary structure 









.












Template SS confidence 















































































   77..80.........90.........100.... .....110.........120.........130.........140.........150.....
 
   156
Predicted Secondary structure 
Query SS confidence 
Query Sequence  T
Query Conservation 
Alig confidence 
Template Conservation 
Template Sequence  I
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   156
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions