Job Description P77503 Confidence 98.61% Date Thu Jan 5 12:30:02 GMT 2012 Rank 101 Aligned Residues 148 % Identity 18% Template c3ingA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:homoserine dehydrogenase; PDBTitle: crystal structure of homoserine dehydrogenase (np_394635.1) from2 thermoplasma acidophilum at 1.95 a resolution Resolution 1.95 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30					.	.	.	.	.	.	.	.	.	40	.	.										.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																									.	.	.	.													.	.	.	.	.	.	.	.	.																	.
Query SS confidence																									.	.	.	.													.	.	.	.	.	.	.	.	.																	.
Query Sequence		S	P	L	R	V	A	I	I	G	A	G	Q	V	A	D	K	V	H	A	S	Y	Y	C	.	.	.	.	T	R	N	D	L	E	L	V	A	V	C	D	.	.	.	.	.	.	.	.	.	S	R	L	S	Q	A	Q	A	L	A	E	K	Y	G	N	A	.	S	V	W	D	D	P	Q	A	M	L	L	A	V	K	P
Query Conservation																									.	.	.	.													.	.	.	.	.	.	.	.	.																	.
Alig confidence																			.						.	.	.	.													.	.	.	.	.	.	.	.	.																	.
Template Conservation																			.
Template Sequence		K	E	I	R	I	I	L	X	G	T	G	N	V	G	L	N	V	.	L	R	I	I	D	A	S	N	R	R	R	F	S	I	K	V	V	G	V	S	D	S	R	S	Y	A	S	G	R	N	L	D	I	S	S	I	I	S	N	K	E	K	T	G	R	I	S	D	R	A	F	S	G	P	E	D	L	X	G	E	A	A
Template Known Secondary structure												S							.																						S	S	B					S	S														S		S		S	S	B			S	G	G	G	G	T	T	S
Template Predicted Secondary structure																			.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		74	.	.	.	.	.	80	.	.	.	.					.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.																		.																							.
Query SS confidence													.	.	.	.																		.																							.
Query Sequence		D	V	V	S	V	C	S	P	N	R	F	.	.	.	.	H	Y	E	H	T	L	M	A	L	E	A	G	C	H	V	M	C	.	E	K	P	P	A	M	T	P	E	Q	A	R	E	M	C	D	T	A	R	K	L	G	.	K	V	L	A	Y	D	F	H	H	R	F	A	L	D	T	Q	Q	L	R	E	Q	V	T	N
Query Conservation													.	.	.	.																		.																							.
Alig confidence													.	.	.	.																		.			.	.																			.																							.
Template Conservation																																					.	.																																										.
Template Sequence		D	L	L	V	D	C	T	P	A	S	R	D	G	V	R	E	Y	S	L	Y	R	X	A	F	E	S	G	X	N	V	V	T	A	N	K	.	.	S	G	L	A	N	K	W	H	D	I	X	D	S	A	N	Q	N	S	K	Y	I	R	Y	E	A	T	V	A	G	G	V	P	L	F	S	V	L	D	Y	S	I	.	L
Template Known Secondary structure		S										S	S	S													T	T									.	.																		T						G	G	G	S	S	T	T	S									T		.	T
Template Predicted Secondary structure																																					.	.																																										.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	L	G	E	I	Y	V	T	T	A	R	A	L
Query Conservation
Alig confidence				.	.
Template Conservation				.	.
Template Sequence		P	S	.	.	K	V	K	R	F	R	G	I	V	S
Template Known Secondary structure		T		.	.
Template Predicted Secondary structure				.	.
Template SS confidence
		160	.			.	.	.	.	.	.	.	.	170	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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